Anchorpoints

Gene id
CM01596G01330
Organism
Cucumis melo

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL8G01510No description available.scaffold_8-View
AL4G20780No description available.scaffold_4-View
AL1G33680No description available.scaffold_1+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G32361RING/U-box superfamily protein Putative RING-H2 finger protein ATL1F precursor. ATL1F; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G35420.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).1+View
AT2G35420RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G17920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). RING/U-box superfamily protein2-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR01G09130No description available.A01-View
BR06G36840No description available.A06-View
BR05G09290No description available.A05+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_008G01240No description available.scaffold_8-View
CRU_004G16510No description available.scaffold_4-View
CRU_001G29310No description available.scaffold_1+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0004G18150No description available.scaffold_4+View
EG0005G02490No description available.scaffold_5-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G33830Probable RING-H2 finger protein ATL5GLG5+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM09G33800No description available.Gm09+View
GM08G36560No description available.Gm08+View
GM01G02130No description available.Gm01+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR04G18420No description available.Chr04+View
GR08G22570No description available.Chr08+View
GR06G21730No description available.Chr06-View
GR07G03260No description available.Chr07+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G066740zinc finger C C3HC4 type (RING finger) proteinchr8+View
MT5G030010RING-H2 zinc finger proteinchr5-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_005G03660No description available.scaffold_5+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G09310No description available.Chr03+View
PT01G14090No description available.Chr01+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30054G00310No description available.30054-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL08G005110Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech08-View
SL08G076800Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech08+View
SL06G061250Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech06+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST08G021430RING finger protein (AHRD V1 *-*- C6EUD3_SOYBN); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr08+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0003G22420No description available.scaffold_3+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G17640similar to AT2G35420|zinc finger (C3HC4-type RING finger) family proteinch4-6-View
TP4G17270similar to AT2G34990|zinc finger (C3HC4-type RING finger) family proteinch4-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV02G02190name=GSVIVG01013145001;chr2+View


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Gene id
Species
Description
Chromosome
Strand