Anchorpoints

Gene id
CM00084G00570
Organism
Cucumis melo

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CM00063G00860No description available.CM3.5_scaffold00063+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G13660No description available.scaffold_4+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G29140pumilio 3 (PUM3); FUNCTIONS IN: RNA binding, binding; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Nucleic acid binding NABP (InterPro:IPR012940), Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 1 (TAIR:AT2G29200.1); Has 3920 Blast hits to 2027 proteins in 241 species: Archae - 0; Bacteria - 8; Metazoa - 815; Fungi - 1344; Plants - 871; Viruses - 0; Other Eukaryotes - 882 (source: NCBI BLink). pumilio 3 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.2+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00012G02470No description available.scaffold00012+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR04G17030No description available.A04-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV7G06190No description available.Bvchr7.sca021-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL02G20220No description available.Chr2-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00081G01140No description available.supercontig_81-View
CP00001G04210No description available.supercontig_1+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G09980No description available.scaffold_4-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00014G00100No description available.scaffold00014-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G18440No description available.scaffold_2-View
EG0010G15210No description available.scaffold_10+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV7G25920Pumilio homolog 2 (Pumilio-2) (probable)LG7-View
FV3G29190Pumilio homolog 2 (Pumilio-2) (similar to)LG3+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM12G06430No description available.Gm12-View
GM15G04060No description available.Gm15-View
GM11G14500No description available.Gm11-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR01G11200No description available.Chr01+View
GR03G12920No description available.Chr03-View
GR09G09720No description available.Chr09-View
GR04G00540No description available.Chr04+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD11G007530No description available.11-View
MD03G006380No description available.3-View
MD01G010520No description available.1-View
MD01G012540No description available.1+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME07991G00820No description available.scaffold07991+View
ME06916G00410No description available.scaffold06916-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G080390pumilio-family RNA-binding repeatproteinchr5+View
MT2G097670pumilio Mpt5 protein C putativechr2+View
MT4G064670pumilio Mpt5 protein C putativechr4+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G22950No description available.scaffold_2+View
PPE_006G07070No description available.scaffold_6-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G24340No description available.Chr01+View
PT08G05830No description available.Chr08+View
PT09G03490No description available.Chr09+View
PT10G20110No description available.Chr10-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G076340mRNA binding protein Pumilio 2 (AHRD V1 *-** C1GCQ9_PARBD)%3B contains Interpro domain(s) IPR011989 Armadillo-like helicalch06+View
SL06G005670mRNA binding protein Pumilio 2 (AHRD V1 *-** C1GCQ9_PARBD)%3B contains Interpro domain(s) IPR011989 Armadillo-like helicalch06+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST06G005090mRNA binding protein Pumilio 2 (AHRD V1 *-** C1GCQ9_PARBD); contains Interpro domain(s) IPR011989 Armadillo-like helicalchr06+View
ST06G032150mRNA binding protein Pumilio 2 (AHRD V1 *-** C1GCQ9_PARBD); contains Interpro domain(s) IPR011989 Armadillo-like helicalchr06+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G31190No description available.scaffold_9-View
TC0010G03540No description available.scaffold_10r+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G11960similar to AT2G29190|APUM2 (Arabidopsis Pumilio 2)ch4-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G03220name=GSVIVG01024919001;chr6+View


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Gene id
Species
Description
Chromosome
Strand