Anchorpoints

Gene id
CM00068G01180
Organism
Cucumis melo

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G11570TRICHOME BIREFRINGENCE-LIKE 8 (TBL8); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 9 (TAIR:AT5G06230.1); Has 1362 Blast hits to 1341 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 6; Plants - 1353; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 83-View
AT5G06230TRICHOME BIREFRINGENCE-LIKE 9 (TBL9); LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 8 (TAIR:AT3G11570.1); Has 1361 Blast hits to 1339 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 1354; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 95-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR05G31050No description available.A05+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV7G11360No description available.Bvchr7.sca001+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G19490No description available.Chr5+View
CL04G10150No description available.Chr4-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G05000No description available.scaffold_6-View
CRU_003G10430No description available.scaffold_3-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0001G22180No description available.scaffold_1+View
EG0011G21530No description available.scaffold_11-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G31530CAS1 domain-containing protein 1, Precursor (probable)LG6+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM10G08840No description available.Gm10-View
GM02G36101No description available.Gm02+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR06G15260No description available.Chr06+View
GR02G23800No description available.Chr02+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD14G003100No description available.14-View
MD12G002940No description available.12-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02892G00320No description available.scaffold02892-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT1G058380Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family proteinchr1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT16G07480No description available.Chr16+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30032G00130No description available.30032+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G010260No description available.ch09+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST09G009720No description available.chr09-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0005G09360No description available.scaffold_5-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G09810No description available.ch3-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV08G12440name=GSVIVG01033900001;chr8+View


Download

Gene id
Species
Description
Chromosome
Strand