Anchorpoints

Gene id
CM00022G03970
Organism
Cucumis melo

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G57300INO80 ortholog (INO80); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: somatic cell DNA recombination, positive regulation of DNA repair, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA binding domain, INO80 (InterPro:IPR020838), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein (TAIR:AT3G12810.1). Encodes the Arabidopsis INO80 ortholog of the SWI/SNF ATPase family. Functions as a positive regulator of DNA homologous recombination (HR). In INO80 mutants, the HR frequency is reduced to 15% of that in the wild-type. Mutation in INO80 does not affect sensitivity to genotoxic agents and efficiency of T-DNA integration. INO80 was also shown to regulate a subset of the Arabidopsis transcriptome. INO80 ortholog3+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL02G23010No description available.Chr2-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G06300No description available.scaffold_10-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM14G03780No description available.Gm14+View
GM02G45000No description available.Gm02-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06916G01520No description available.scaffold06916-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G05300similar to AT3G57300|INO80 (INO80 ORTHOLOG)ch5-1-View


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Gene id
Species
Description
Chromosome
Strand