Anchorpoints
- Gene id
- CM00021G02140
- Organism
- Cucumis melo
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL7G25350 | No description available. | scaffold_7 | - | View |
AL8G00870 | No description available. | scaffold_8 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G17600 | Encodes Lil3:1 (light-harvesting-like) protein. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. A generic LHC motif is present in Lil3:1. Chlorophyll A-B binding family protein LIL3:1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT5G47110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | 4 | + | View |
AT5G47110 | Chlorophyll A-B binding family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis, light harvesting; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT4G17600.1); Has 86 Blast hits to 86 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 79; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). Chlorophyll A-B binding family protein | 5 | - | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR_00002G01590 | No description available. | scaffold00002 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR06G36400 | No description available. | A06 | + | View |
BR09G22430 | No description available. | A09 | + | View |
BR03G43970 | No description available. | A03 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV5G22580 | No description available. | Bvchr5.sca004 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL10G02190 | No description available. | Chr10 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_007G22740 | No description available. | scaffold_7 | - | View |
CRU_008G00670 | No description available. | scaffold_8 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00095G00270 | No description available. | scaffold00095 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0005G03220 | No description available. | scaffold_5 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV5G31680 | Endonuclease (probable) | LG5 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM01G41320 | No description available. | Gm01 | - | View |
GM05G05450 | No description available. | Gm05 | + | View |
GM17G15730 | No description available. | Gm17 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR04G19220 | No description available. | Chr04 | - | View |
GR08G23110 | No description available. | Chr08 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD06G004850 | No description available. | 6 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME11581G01230 | No description available. | scaffold11581 | + | View |
ME11341G00610 | No description available. | scaffold11341 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT4G099330 | light harvesting-like protein | chr4 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_005G06150 | No description available. | scaffold_5 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT03G08350 | No description available. | Chr03 | + | View |
PT01G15130 | No description available. | Chr01 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL08G007180 | Light harvesting-like protein 3 (AHRD V1 **-- A9P991_POPTR) | ch08 | - | View |
SL08G077880 | Light harvesting-like protein 3 (AHRD V1 **-- B9N2V9_POPTR) | ch08 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST08G006020 | Light harvesting-like protein 3 (AHRD V1 **-- B9N2V9_POPTR) | chr08 | + | View |
ST08G023430 | Light harvesting-like protein 3 (AHRD V1 **-- B9N2V9_POPTR) | chr08 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0003G23830 | No description available. | scaffold_3 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP2G11920 | similar to AT5G47110|lil3 protein, putative | ch2-4 | - | View |
TP7G16560 | similar to AT4G17600|LIL3:1 | ch7-4 | - | View |