PLAZA 3.0 Dicots : colinear gene pairs

Anchorpoints

Gene id: CM00019G03550
Organism: Cucumis melo

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id	Description	Chromosome	Strand	Multiplicon
AL7G01060	No description available.	scaffold_7	-	View

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT4G39140	RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G21500.1); Has 1557 Blast hits to 280 proteins in 56 species: Archae - 0; Bacteria - 6; Metazoa - 62; Fungi - 44; Plants - 176; Viruses - 0; Other Eukaryotes - 1269 (source: NCBI BLink).	4	-	View
AT2G21500	RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G39140.5); Has 279 Blast hits to 254 proteins in 46 species: Archae - 0; Bacteria - 2; Metazoa - 46; Fungi - 31; Plants - 177; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). RING/U-box superfamily protein	2	-	View

Brassica rapa

Gene id	Description	Chromosome	Strand	Multiplicon
BR08G20050	No description available.	A08	+	View
BR09G44550	No description available.	A09	+	View
BR06G39450	No description available.	A06	+	View

Beta vulgaris

Gene id	Description	Chromosome	Strand	Multiplicon
BV9G13100	No description available.	Bvchr9.sca026	-	View

Citrullus lanatus

Gene id	Description	Chromosome	Strand	Multiplicon
CL11G14760	No description available.	Chr11	+	View
CL02G05030	No description available.	Chr2	-	View

Capsella rubella

Gene id	Description	Chromosome	Strand	Multiplicon
CRU_007G00940	No description available.	scaffold_7	-	View

Eucalyptus grandis

Gene id	Description	Chromosome	Strand	Multiplicon
EG0007G12400	No description available.	scaffold_7	+	View

Glycine max

Gene id	Description	Chromosome	Strand	Multiplicon
GM17G37190	No description available.	Gm17	+	View
GM04G01190	No description available.	Gm04	-	View
GM06G01220	No description available.	Gm06	-	View

Gossypium raimondii

Gene id	Description	Chromosome	Strand	Multiplicon
GR13G03490	No description available.	Chr13	-	View
GR08G03070	No description available.	Chr08	+	View

Medicago truncatula

Gene id	Description	Chromosome	Strand	Multiplicon
MT3G117180	RING/U-box protein	chr3	+	View

Prunus persica

Gene id	Description	Chromosome	Strand	Multiplicon
PPE_008G10900	No description available.	scaffold_8	-	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT04G15840	No description available.	Chr04	+	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL01G109910	AT2G21500 protein (Fragment) (AHRD V1 **-- B9DHX0_ARATH)%3B contains Interpro domain(s) IPR001841 Zinc finger%2C RING-type	ch01	+	View

Solanum tuberosum

Gene id	Description	Chromosome	Strand	Multiplicon
ST01G047350	AT2G21500 protein (Fragment) (AHRD V1 *--- B9DHX0_ARATH); contains Interpro domain(s) IPR001841 Zinc finger, RING-type	chr01	+	View

Theobroma cacao

Gene id	Description	Chromosome	Strand	Multiplicon
TC0002G07660	No description available.	scaffold_2	-	View

Thellungiella parvula

Gene id	Description	Chromosome	Strand	Multiplicon
TP7G36680	similar to AT4G39140\|protein binding / zinc ion binding	ch7-6	+	View
TP4G00660	similar to AT2G21500\|protein binding / zinc ion binding	ch4-1	-	View