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Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- CM00018G02480
- Organism
- Cucumis melo
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT3G21350 | MED6; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med6 (InterPro:IPR007018), Mediator complex, subunit Med6, metazoa/plant (InterPro:IPR016820); Has 341 Blast hits to 341 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 132; Plants - 38; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). RNA polymerase transcriptional regulation mediator-related | 3 | + | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL07G12740 | No description available. | Chr7 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00131G00010 | No description available. | supercontig_131 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_003G20410 | No description available. | scaffold_3 | + | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00074G00300 | No description available. | scaffold00074 | - | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV4G21520 | Putative mediator of RNA polymerase II transcription subunit 6 (probable) | LG4 | + | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM08G21290 | No description available. | Gm08 | + | View |
| GM07G01650 | No description available. | Gm07 | + | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR11G06940 | No description available. | Chr11 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME05875G00270 | No description available. | scaffold05875 | - | View |
| ME12525G01070 | No description available. | scaffold12525 | + | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT8G015230 | mediator of RNA polymerase II transcription subunit 6 | chr8 | - | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_003G04090 | No description available. | scaffold_3 | + | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC30146G00320 | No description available. | 30146 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL12G044640 | Mediator of RNA polymerase II transcription subunit 6 (AHRD V1 *-*- C1C411_RANCA)%3B contains Interpro domain(s) IPR016820 Mediator complex%2C subunit Med6%2C metazoa/plant | ch12 | - | View |
| SL03G121210 | Mediator of RNA polymerase II transcription subunit 6 (AHRD V1 **** B4K995_DROMO)%3B contains Interpro domain(s) IPR007018 Mediator complex%2C subunit Med6 | ch03 | - | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST03G035770 | Mediator of RNA polymerase II transcription subunit 6 (AHRD V1 ***- B4K995_DROMO); contains Interpro domain(s) IPR007018 Mediator complex, subunit Med6 | chr03 | + | View |
| ST12G022450 | Mediator of RNA polymerase II transcription subunit 6 (AHRD V1 **** E2BN56_9HYME); contains Interpro domain(s) IPR016820 Mediator complex, subunit Med6, metazoa/plant | chr12 | - | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP3G19410 | similar to AT3G21350|RNA polymerase transcriptional regulation mediator-related | ch3-1 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV09G03830 | name=GSVIVG01016927001; | chr9 | + | View |