Anchorpoints

Gene id
CM00018G01190
Organism
Cucumis melo

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CM00006G05310No description available.CM3.5_scaffold00006-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G03690No description available.scaffold_1+View
AL3G41170No description available.scaffold_3+View
AL1G03120No description available.scaffold_1-View
AL1G05680No description available.scaffold_1+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G03800encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-10). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. ERF domain protein 10 ERF domain protein 10 (ERF10); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: erf domain protein 9 (TAIR:AT5G44210.1); Has 6303 Blast hits to 5828 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6292; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).1-View
AT1G04370Ethylene-responsive element binding factor 14 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Ethylene-responsive element binding factor 14 (ERF14); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G43410.1); Has 6105 Blast hits to 5744 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6091; Viruses - 2; Other Eukaryotes - 12 (source: NCBI BLink).1+View
AT2G31230encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ethylene-responsive element binding factor 15 ethylene-responsive element binding factor 15 (ERF15); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: chloroplast; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: octadecanoid-responsive Arabidopsis AP2/ERF 59 (TAIR:AT1G06160.1); Has 7638 Blast hits to 6656 proteins in 461 species: Archae - 0; Bacteria - 190; Metazoa - 867; Fungi - 122; Plants - 5748; Viruses - 12; Other Eukaryotes - 699 (source: NCBI BLink).2-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR10G03400No description available.A10-View
BR04G18500No description available.A04-View
BR05G12850No description available.A05-View
BR10G03840No description available.A10+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV3G09630No description available.Bvchr3.sca001-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL07G02030No description available.Chr7-View
CL05G04690No description available.Chr5-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G12180No description available.scaffold_4-View
CRU_001G02710No description available.scaffold_1-View
CRU_001G03260No description available.scaffold_1+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0011G27530No description available.scaffold_11-View
EG0002G12700No description available.scaffold_2+View
EG0008G25010No description available.scaffold_8-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV4G00120Ethylene-responsive transcription factor 14 (AtERF14) (similar to)LG4+View
FV2G08990Ethylene-responsive transcription factor ERF098 (similar to)LG2+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM10G04160No description available.Gm10+View
GM19G34650No description available.Gm19+View
GM15G01140No description available.Gm15+View
GM13G18330No description available.Gm13+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR05G04920No description available.Chr05+View
GR01G25240No description available.Chr01+View
GR01G17660No description available.Chr01+View
GR04G22080No description available.Chr04+View
GR07G14570No description available.Chr07-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ5G020390No description available.chr5+View
LJ6G000390No description available.chr6-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD05G013280No description available.5-View
MD10G014570No description available.10-View
MD15G025910No description available.15+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME09880G00210No description available.scaffold09880+View
ME01551G01060No description available.scaffold01551-View
ME10563G01120No description available.scaffold10563+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT1G069940ethylene-responsive transcription factor 1Bchr1-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_008G23860No description available.scaffold_8-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G03900No description available.Chr02-View
PT05G22310No description available.Chr05-View
PT08G16600No description available.Chr08+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G066340Ethylene responsive transcription factor 1b (AHRD V1 *-*- C0J9I8_9ROSA)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch09+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G25730No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G03180similar to AT1G04370|ATERF14 (Ethylene-responsive element binding factor 14)ch1-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G10790name=GSVIVG01028312001;chr7+View


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Gene id
Species
Description
Chromosome
Strand