Anchorpoints
- Gene id
- CM00018G01190
- Organism
- Cucumis melo
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00006G05310 | No description available. | CM3.5_scaffold00006 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL1G03690 | No description available. | scaffold_1 | + | View |
AL3G41170 | No description available. | scaffold_3 | + | View |
AL1G03120 | No description available. | scaffold_1 | - | View |
AL1G05680 | No description available. | scaffold_1 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G03800 | encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-10). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. ERF domain protein 10 ERF domain protein 10 (ERF10); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: erf domain protein 9 (TAIR:AT5G44210.1); Has 6303 Blast hits to 5828 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6292; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). | 1 | - | View |
AT1G04370 | Ethylene-responsive element binding factor 14 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Ethylene-responsive element binding factor 14 (ERF14); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G43410.1); Has 6105 Blast hits to 5744 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6091; Viruses - 2; Other Eukaryotes - 12 (source: NCBI BLink). | 1 | + | View |
AT2G31230 | encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ethylene-responsive element binding factor 15 ethylene-responsive element binding factor 15 (ERF15); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: chloroplast; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: octadecanoid-responsive Arabidopsis AP2/ERF 59 (TAIR:AT1G06160.1); Has 7638 Blast hits to 6656 proteins in 461 species: Archae - 0; Bacteria - 190; Metazoa - 867; Fungi - 122; Plants - 5748; Viruses - 12; Other Eukaryotes - 699 (source: NCBI BLink). | 2 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR10G03400 | No description available. | A10 | - | View |
BR04G18500 | No description available. | A04 | - | View |
BR05G12850 | No description available. | A05 | - | View |
BR10G03840 | No description available. | A10 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV3G09630 | No description available. | Bvchr3.sca001 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL07G02030 | No description available. | Chr7 | - | View |
CL05G04690 | No description available. | Chr5 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_004G12180 | No description available. | scaffold_4 | - | View |
CRU_001G02710 | No description available. | scaffold_1 | - | View |
CRU_001G03260 | No description available. | scaffold_1 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0011G27530 | No description available. | scaffold_11 | - | View |
EG0002G12700 | No description available. | scaffold_2 | + | View |
EG0008G25010 | No description available. | scaffold_8 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV4G00120 | Ethylene-responsive transcription factor 14 (AtERF14) (similar to) | LG4 | + | View |
FV2G08990 | Ethylene-responsive transcription factor ERF098 (similar to) | LG2 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM10G04160 | No description available. | Gm10 | + | View |
GM19G34650 | No description available. | Gm19 | + | View |
GM15G01140 | No description available. | Gm15 | + | View |
GM13G18330 | No description available. | Gm13 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR05G04920 | No description available. | Chr05 | + | View |
GR01G25240 | No description available. | Chr01 | + | View |
GR01G17660 | No description available. | Chr01 | + | View |
GR04G22080 | No description available. | Chr04 | + | View |
GR07G14570 | No description available. | Chr07 | - | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ5G020390 | No description available. | chr5 | + | View |
LJ6G000390 | No description available. | chr6 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD05G013280 | No description available. | 5 | - | View |
MD10G014570 | No description available. | 10 | - | View |
MD15G025910 | No description available. | 15 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME09880G00210 | No description available. | scaffold09880 | + | View |
ME01551G01060 | No description available. | scaffold01551 | - | View |
ME10563G01120 | No description available. | scaffold10563 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT1G069940 | ethylene-responsive transcription factor 1B | chr1 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_008G23860 | No description available. | scaffold_8 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT02G03900 | No description available. | Chr02 | - | View |
PT05G22310 | No description available. | Chr05 | - | View |
PT08G16600 | No description available. | Chr08 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL09G066340 | Ethylene responsive transcription factor 1b (AHRD V1 *-*- C0J9I8_9ROSA)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-binding | ch09 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G25730 | No description available. | scaffold_1 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G03180 | similar to AT1G04370|ATERF14 (Ethylene-responsive element binding factor 14) | ch1-1 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV07G10790 | name=GSVIVG01028312001; | chr7 | + | View |