Anchorpoints

Gene id
CM00014G03450
Organism
Cucumis melo

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CM00019G03400No description available.CM3.5_scaffold00019-View
CM00007G09210No description available.CM3.5_scaffold00007-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G00470No description available.scaffold_4+View
AL2G24490No description available.scaffold_2+View
AL7G00860No description available.scaffold_7+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G75540Encodes a B-box zinc finger transcription factor BBX21 (also named STH2/salt tolerance homolog2 and LHUS/long hypocotyl under shade). Interacts with COP1 to control de-etiolation. Also genetically interacts with COP1 to regulate shade avoidance. salt tolerance homolog2 salt tolerance homolog2 (STH2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT4G39070.1); Has 3177 Blast hits to 2249 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 43; Plants - 2068; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink).1+View
AT4G38960B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT2G21320.1). B-box type zinc finger family protein4+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G23230No description available.A02+View
BR09G44680No description available.A09-View
BR07G30830No description available.A07+View
BR08G20120No description available.A08+View
BR01G00230No description available.A01-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV1G08190No description available.Bvchr1.sca001-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL08G14310No description available.Chr8+View
CL01G20250No description available.Chr1-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00150G00200No description available.supercontig_150+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G21130No description available.scaffold_2+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00002G05030No description available.scaffold00002+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0009G19970No description available.scaffold_9+View
EG0009G10660No description available.scaffold_9-View
EG0006G13110No description available.scaffold_6+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV1G13990Probable salt tolerance-like protein At1g78600LG1+View
FV2G16830Probable salt tolerance-like protein At1g75540LG2+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM11G07930No description available.Gm11-View
GM14G40650No description available.Gm14-View
GM06G02970No description available.Gm06-View
GM17G37430No description available.Gm17+View
GM04G02960No description available.Gm04-View
GM12G04131No description available.Gm12+View
GM04G01120No description available.Gm04-View
GM01G37370No description available.Gm01+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G19690No description available.Chr07+View
GR02G00420No description available.Chr02+View
GR03G01120No description available.Chr03+View
GR11G09960No description available.Chr11+View
GR08G06410No description available.Chr08+View
GR09G19700No description available.Chr09-View
GR05G11070No description available.Chr05+View
GR10G00660No description available.Chr10-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD12G015210No description available.12-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02994G00160No description available.scaffold02994+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G071200salt tolerance-like proteinchr4+View
MT3G113070salt tolerance-like proteinchr3+View
MT1G023260salt tolerance-like proteinchr1+View
MT5G021580salt tolerance-like proteinchr5-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G37930No description available.scaffold_1-View
PPE_007G18640No description available.scaffold_7-View
PPE_008G10580No description available.scaffold_8-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G11710No description available.Chr05+View
PT04G16100No description available.Chr04+View
PT05G23450No description available.Chr05+View
PT07G01520No description available.Chr07+View
PT02G02820No description available.Chr02-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30170G04830No description available.30170+View
RC30131G02530No description available.30131+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G084420Zinc finger protein CONSTANS-LIKE 2 (AHRD V1 **-- COL2_ARATH)%3B contains Interpro domain(s) IPR000315 Zinc finger%2C B-boxch02+View
SL04G081020Zinc finger protein CONSTANS-LIKE 3 (AHRD V1 *--- COL3_ARATH)%3B contains Interpro domain(s) IPR000315 Zinc finger%2C B-boxch04+View
SL12G089240Zinc finger protein CONSTANS-LIKE 3 (AHRD V1 *--- COL3_ARATH)%3B contains Interpro domain(s) IPR000315 Zinc finger%2C B-boxch12+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G047610Zinc finger protein CONSTANS-LIKE 1 (AHRD V1 *--- COL1_ARATH); contains Interpro domain(s) IPR000315 Zinc finger, B-boxchr01+View
ST12G027420Zinc finger protein CONSTANS-LIKE 3 (AHRD V1 *--- COL3_ARATH); contains Interpro domain(s) IPR000315 Zinc finger, B-boxchr12+View
ST02G027590Zinc finger protein CONSTANS-LIKE 3 (AHRD V1 *--- COL3_ARATH); contains Interpro domain(s) IPR000315 Zinc finger, B-boxchr02+View
ST04G034410Zinc finger protein CONSTANS-LIKE 3 (AHRD V1 *--- COL3_ARATH); contains Interpro domain(s) IPR000315 Zinc finger, B-boxchr04+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G07190No description available.scaffold_2+View
TC0008G03580No description available.scaffold_8+View
TC0001G02110No description available.scaffold_1+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G00500similar to AT2G21320|zinc finger (B-box type) family proteinch4-1+View
TP5G30670similar to AT1G75540|STH2 (SALT TOLERANCE HOMOLOG2)ch5-7+View
TP7G36770similar to AT4G39070|zinc finger (B-box type) family proteinch7-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G09880name=GSVIVG01009821001;chr18+View
VV03G06160name=GSVIVG01024204001;chr3+View


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Gene id
Species
Description
Chromosome
Strand