Anchorpoints

Gene id
CM00006G01730
Organism
Cucumis melo

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CM00005G08210No description available.CM3.5_scaffold00005+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL5G32210No description available.scaffold_5+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G61490Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G23500.1); Has 4119 Blast hits to 4104 proteins in 500 species: Archae - 6; Bacteria - 1446; Metazoa - 14; Fungi - 1115; Plants - 1406; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink). Pectin lyase-like superfamily protein3+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR09G40750No description available.A09+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV5G07020No description available.Bvchr5.sca002-View
BV3G03430No description available.Bvchr3.sca003-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G01620No description available.Chr5-View
CL01G00790No description available.Chr1-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G26760No description available.scaffold_5+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00001G03460No description available.scaffold00001+View
CS00009G01360No description available.scaffold00009+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0005G00980No description available.scaffold_5-View
EG0004G14670No description available.scaffold_4-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G03450Probable polygalacturonase (PG) (putative)LG5+View
FV7G07300Probable polygalacturonase (PG) (putative)LG7-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM16G03680No description available.Gm16-View
GM20G30240No description available.Gm20+View
GM08G02050No description available.Gm08+View
GM18G47130No description available.Gm18+View
GM07G07280No description available.Gm07-View
GM10G37530No description available.Gm10-View
GM05G37490No description available.Gm05-View
GM09G39200No description available.Gm09-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G27470No description available.Chr08-View
GR03G15580No description available.Chr03-View
GR07G10220No description available.Chr07+View
GR07G01290No description available.Chr07+View
GR01G15890No description available.Chr01-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD07G019090No description available.7+View
MD01G020750No description available.1+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME00341G00540No description available.scaffold00341+View
ME03581G01490No description available.scaffold03581-View
ME05280G00630No description available.scaffold05280+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G028725polygalacturonase/glycoside hydrolase family proteinchr8-View
MT8G098840polygalacturonase/glycoside hydrolase family proteinchr8+View
MT7G078680polygalacturonase/glycoside hydrolase family proteinchr7+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G17050No description available.scaffold_2+View
PPE_005G11390No description available.scaffold_5+View
PPE_002G28790No description available.scaffold_2+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G13170No description available.Chr03+View
PT01G10000No description available.Chr01-View
PT02G16240No description available.Chr02+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30174G03260No description available.30174+View
RC30169G03680No description available.30169-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G094970Glycoside hydrolase family 28 protein/polygalacturonase family protein (AHRD V1 **-- Q1PF10_ARATH)%3B contains Interpro domain(s) IPR012334 Pectin lyase foldch01-View
SL08G082170Glycoside hydrolase family 28 protein/polygalacturonase family protein (AHRD V1 **-- Q1PF10_ARATH)%3B contains Interpro domain(s) IPR012334 Pectin lyase foldch08-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST08G028210Receptor-like protein kinase 5 (AHRD V1 *--- RLK5_ARATH); contains Interpro domain(s) IPR012334 Pectin lyase foldchr08+View
ST05G022320Glycoside hydrolase family 28 protein/polygalacturonase family protein (AHRD V1 **-- Q1PF10_ARATH); contains Interpro domain(s) IPR012334 Pectin lyase foldchr05-View
ST01G032380Glycoside hydrolase family 28 protein/polygalacturonase family protein (AHRD V1 **-- Q1PF10_ARATH); contains Interpro domain(s) IPR012334 Pectin lyase foldchr01-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0003G18510No description available.scaffold_3+View
TC0003G28080No description available.scaffold_3+View
TC0001G35180No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G01910similar to AT3G61490|glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinch5-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV16G07940name=GSVIVG01028861001;chr16+View
VV15G05450name=GSVIVG01026985001;chr15+View


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Gene id
Species
Description
Chromosome
Strand