Anchorpoints
- Gene id
- CM00006G01730
- Organism
- Cucumis melo
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00005G08210 | No description available. | CM3.5_scaffold00005 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL5G32210 | No description available. | scaffold_5 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G61490 | Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G23500.1); Has 4119 Blast hits to 4104 proteins in 500 species: Archae - 6; Bacteria - 1446; Metazoa - 14; Fungi - 1115; Plants - 1406; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink). Pectin lyase-like superfamily protein | 3 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR09G40750 | No description available. | A09 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV5G07020 | No description available. | Bvchr5.sca002 | - | View |
BV3G03430 | No description available. | Bvchr3.sca003 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL05G01620 | No description available. | Chr5 | - | View |
CL01G00790 | No description available. | Chr1 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_005G26760 | No description available. | scaffold_5 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00001G03460 | No description available. | scaffold00001 | + | View |
CS00009G01360 | No description available. | scaffold00009 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0005G00980 | No description available. | scaffold_5 | - | View |
EG0004G14670 | No description available. | scaffold_4 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV5G03450 | Probable polygalacturonase (PG) (putative) | LG5 | + | View |
FV7G07300 | Probable polygalacturonase (PG) (putative) | LG7 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM16G03680 | No description available. | Gm16 | - | View |
GM20G30240 | No description available. | Gm20 | + | View |
GM08G02050 | No description available. | Gm08 | + | View |
GM18G47130 | No description available. | Gm18 | + | View |
GM07G07280 | No description available. | Gm07 | - | View |
GM10G37530 | No description available. | Gm10 | - | View |
GM05G37490 | No description available. | Gm05 | - | View |
GM09G39200 | No description available. | Gm09 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR08G27470 | No description available. | Chr08 | - | View |
GR03G15580 | No description available. | Chr03 | - | View |
GR07G10220 | No description available. | Chr07 | + | View |
GR07G01290 | No description available. | Chr07 | + | View |
GR01G15890 | No description available. | Chr01 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD07G019090 | No description available. | 7 | + | View |
MD01G020750 | No description available. | 1 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME00341G00540 | No description available. | scaffold00341 | + | View |
ME03581G01490 | No description available. | scaffold03581 | - | View |
ME05280G00630 | No description available. | scaffold05280 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT8G028725 | polygalacturonase/glycoside hydrolase family protein | chr8 | - | View |
MT8G098840 | polygalacturonase/glycoside hydrolase family protein | chr8 | + | View |
MT7G078680 | polygalacturonase/glycoside hydrolase family protein | chr7 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_002G17050 | No description available. | scaffold_2 | + | View |
PPE_005G11390 | No description available. | scaffold_5 | + | View |
PPE_002G28790 | No description available. | scaffold_2 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT03G13170 | No description available. | Chr03 | + | View |
PT01G10000 | No description available. | Chr01 | - | View |
PT02G16240 | No description available. | Chr02 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30174G03260 | No description available. | 30174 | + | View |
RC30169G03680 | No description available. | 30169 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL01G094970 | Glycoside hydrolase family 28 protein/polygalacturonase family protein (AHRD V1 **-- Q1PF10_ARATH)%3B contains Interpro domain(s) IPR012334 Pectin lyase fold | ch01 | - | View |
SL08G082170 | Glycoside hydrolase family 28 protein/polygalacturonase family protein (AHRD V1 **-- Q1PF10_ARATH)%3B contains Interpro domain(s) IPR012334 Pectin lyase fold | ch08 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST08G028210 | Receptor-like protein kinase 5 (AHRD V1 *--- RLK5_ARATH); contains Interpro domain(s) IPR012334 Pectin lyase fold | chr08 | + | View |
ST05G022320 | Glycoside hydrolase family 28 protein/polygalacturonase family protein (AHRD V1 **-- Q1PF10_ARATH); contains Interpro domain(s) IPR012334 Pectin lyase fold | chr05 | - | View |
ST01G032380 | Glycoside hydrolase family 28 protein/polygalacturonase family protein (AHRD V1 **-- Q1PF10_ARATH); contains Interpro domain(s) IPR012334 Pectin lyase fold | chr01 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0003G18510 | No description available. | scaffold_3 | + | View |
TC0003G28080 | No description available. | scaffold_3 | + | View |
TC0001G35180 | No description available. | scaffold_1 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP5G01910 | similar to AT3G61490|glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein | ch5-1 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV16G07940 | name=GSVIVG01028861001; | chr16 | + | View |
VV15G05450 | name=GSVIVG01026985001; | chr15 | + | View |