Anchorpoints

Gene id
CM00001G02270
Organism
Cucumis melo

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CM00030G02900No description available.CM3.5_scaffold00030-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G22390No description available.scaffold_2+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G73590Auxin efflux carrier family protein PIN-FORMED 1 (PIN1); FUNCTIONS IN: transporter activity; INVOLVED IN: in 14 processes; LOCATED IN: apical part of cell, plasma membrane, membrane, basal plasma membrane, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G70940.1); Has 5945 Blast hits to 4479 proteins in 806 species: Archae - 51; Bacteria - 3010; Metazoa - 784; Fungi - 134; Plants - 814; Viruses - 35; Other Eukaryotes - 1117 (source: NCBI BLink). Encodes an auxin efflux carrier involved in shoot and root development. It is involved in the maintenance of embryonic auxin gradients. Loss of function severely affects organ initiation, pin1 mutants are characterised by an inflorescence meristem that does not initiate any flowers, resulting in the formation of a naked inflorescence stem. PIN1 is involved in the determination of leaf shape by actively promoting development of leaf margin serrations. In roots, the protein mainly resides at the basal end of the vascular cells, but weak signals can be detected in the epidermis and the cortex. Expression levels and polarity of this auxin efflux carrier change during primordium development suggesting that cycles of auxin build-up and depletion accompany, and may direct, different stages of primordium development. PIN1 action on plant development does not strictly require function of PGP1 and PGP19 proteins.1+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G29350No description available.A07+View
BR02G22260No description available.A02+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL06G14880No description available.Chr6+View
CL04G10520No description available.Chr4+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G19180No description available.scaffold_2+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00039G00170No description available.scaffold00039-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0011G18860No description available.scaffold_11-View
EG0002G07830No description available.scaffold_2-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G16700Auxin efflux carrier component 1 (AtPIN1) (putative)LG5-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM07G11550No description available.Gm07+View
GM09G30700No description available.Gm09-View
GM08G05900No description available.Gm08+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G29000No description available.Chr08-View
GR06G19180No description available.Chr06+View
GR07G00380No description available.Chr07+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ4G051340No description available.chr4+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD06G019180No description available.6-View
MD14G021920No description available.14-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02572G00130No description available.scaffold02572+View
ME06631G00430No description available.scaffold06631+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_005G23400No description available.scaffold_5-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT15G03870No description available.Chr15+View
PT12G04720No description available.Chr12+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G118740Auxin efflux carrier (AHRD V1 ***- Q71T12_MOMCH)%3B contains Interpro domain(s) IPR014024 Auxin efflux carrier%2C subgroupch03+View
SL04G007690Auxin efflux carrier (AHRD V1 **** D6RT11_SOLLC)%3B contains Interpro domain(s) IPR014024 Auxin efflux carrier%2C subgroupch04-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G032230Auxin efflux carrier (AHRD V1 ***- Q71T12_MOMCH); contains Interpro domain(s) IPR014024 Auxin efflux carrier, subgroupchr03+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0003G05730No description available.scaffold_3+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G28490similar to AT1G73590|PIN1 (PIN-FORMED 1)ch5-6+View
TP5G28750similar to AT1G73590|PIN1 (PIN-FORMED 1)ch5-7+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV17G07150name=GSVIVG01008430001;chr17+View


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Gene id
Species
Description
Chromosome
Strand