Anchorpoints
- Gene id
- CM00001G00800
- Organism
- Cucumis melo
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00016G04330 | No description available. | CM3.5_scaffold00016 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL5G02570 | No description available. | scaffold_5 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G03060 | AGAMOUS-like 30 Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL30 is expressed in pollen.It forms heterodimers with other MICK family members. AGAMOUS-like 30 (AGL30); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: pollen development; LOCATED IN: nucleus; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 65 (TAIR:AT1G18750.1); Has 6155 Blast hits to 6155 proteins in 757 species: Archae - 0; Bacteria - 0; Metazoa - 616; Fungi - 313; Plants - 5146; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). | 2 | + | View |
AT1G69540 | Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGAMOUS-like 94 AGAMOUS-like 94 (AGL94); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 30 (TAIR:AT2G03060.2); Has 5894 Blast hits to 5894 proteins in 737 species: Archae - 0; Bacteria - 0; Metazoa - 613; Fungi - 292; Plants - 4926; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). | 1 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR07G26320 | No description available. | A07 | - | View |
BR03G40970 | No description available. | A03 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV5G00720 | No description available. | Bvchr5.sca022 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL04G11980 | No description available. | Chr4 | - | View |
CL05G25150 | No description available. | Chr5 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_008G22220 | No description available. | scaffold_8 | + | View |
CRU_005G01760 | No description available. | scaffold_5 | + | View |
CRU_002G15230 | No description available. | scaffold_2 | - | View |
CRU_008G21530 | No description available. | scaffold_8 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00003G04470 | No description available. | scaffold00003 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0002G04480 | No description available. | scaffold_2 | + | View |
EG0002G05450 | No description available. | scaffold_2 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV0G05360 | MADS-box transcription factor 25 (probable) | scf0513158 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM17G08861 | No description available. | Gm17 | + | View |
GM02G12131 | No description available. | Gm02 | + | View |
GM07G35610 | No description available. | Gm07 | + | View |
GM05G00960 | No description available. | Gm05 | - | View |
GM17G10941 | No description available. | Gm17 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR05G14210 | No description available. | Chr05 | + | View |
GR13G08660 | No description available. | Chr13 | + | View |
GR08G19410 | No description available. | Chr08 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD06G016940 | No description available. | 6 | - | View |
MD13G004570 | No description available. | 13 | - | View |
MD14G020330 | No description available. | 14 | + | View |
MD16G003670 | No description available. | 16 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME12794G02240 | No description available. | scaffold12794 | + | View |
ME08359G02230 | No description available. | scaffold08359 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT4G108720 | MADS-box transcription factor family protein | chr4 | + | View |
MT5G041650 | MADS-box transcription factor family protein | chr5 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G28810 | No description available. | scaffold_1 | + | View |
PPE_005G19980 | No description available. | scaffold_5 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT08G08820 | No description available. | Chr08 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30138G02290 | No description available. | 30138 | - | View |
RC29813G00600 | No description available. | 29813 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL03G115910 | MADS-box transcription factor 1 (AHRD V1 *-*- D1MFS6_HEVBR)%3B contains Interpro domain(s) IPR002100 Transcription factor%2C MADS-box | ch03 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST03G029390 | MADS-box transcription factor 1 (AHRD V1 ***- D1MFS6_HEVBR); contains Interpro domain(s) IPR002100 Transcription factor, MADS-box | chr03 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0003G09350 | No description available. | scaffold_3 | - | View |
TC0002G34250 | No description available. | scaffold_2 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP5G24670 | similar to AT1G69540|AGL94 (AGAMOUS-LIKE 94) | ch5-6 | - | View |
TP2G14060 | similar to AT2G03060|DNA binding / transcription factor | ch2-4 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV17G03570 | name=GSVIVG01007989001; | chr17 | + | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM03G18620 | Zea AGAMOUS homolog2;Zea AGAMOUS homolog2 | 3 | - | View |