Anchorpoints
- Gene id
- CL11G14890
- Organism
- Citrullus lanatus
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL02G04900 | No description available. | Chr2 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL2G24490 | No description available. | scaffold_2 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G75540 | Encodes a B-box zinc finger transcription factor BBX21 (also named STH2/salt tolerance homolog2 and LHUS/long hypocotyl under shade). Interacts with COP1 to control de-etiolation. Also genetically interacts with COP1 to regulate shade avoidance. salt tolerance homolog2 salt tolerance homolog2 (STH2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT4G39070.1); Has 3177 Blast hits to 2249 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 43; Plants - 2068; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink). | 1 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR02G23230 | No description available. | A02 | + | View |
BR08G20120 | No description available. | A08 | + | View |
BR01G00230 | No description available. | A01 | - | View |
BR07G19890 | No description available. | A07 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV9G12830 | No description available. | Bvchr9.sca026 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00059G01610 | No description available. | CM3.5_scaffold00059 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_002G21130 | No description available. | scaffold_2 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00002G05030 | No description available. | scaffold00002 | + | View |
CS00474G00090 | No description available. | scaffold00474 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0009G19970 | No description available. | scaffold_9 | + | View |
EG0007G12520 | No description available. | scaffold_7 | - | View |
EG0006G13110 | No description available. | scaffold_6 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV2G16830 | Probable salt tolerance-like protein At1g75540 | LG2 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM06G02970 | No description available. | Gm06 | - | View |
GM17G37430 | No description available. | Gm17 | + | View |
GM06G01140 | No description available. | Gm06 | - | View |
GM04G01120 | No description available. | Gm04 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR03G01120 | No description available. | Chr03 | + | View |
GR09G19700 | No description available. | Chr09 | - | View |
GR05G11070 | No description available. | Chr05 | + | View |
GR10G00660 | No description available. | Chr10 | - | View |
GR12G15440 | No description available. | Chr12 | - | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ1G043250 | No description available. | chr1 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD12G015210 | No description available. | 12 | - | View |
MD10G007920 | No description available. | 10 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT4G071200 | salt tolerance-like protein | chr4 | + | View |
MT1G023260 | salt tolerance-like protein | chr1 | + | View |
MT3G117320 | salt tolerance-like protein | chr3 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G37930 | No description available. | scaffold_1 | - | View |
PPE_008G10580 | No description available. | scaffold_8 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT09G12200 | No description available. | Chr09 | + | View |
PT05G23450 | No description available. | Chr05 | + | View |
PT04G16100 | No description available. | Chr04 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30170G04830 | No description available. | 30170 | + | View |
RC30131G02530 | No description available. | 30131 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL04G081020 | Zinc finger protein CONSTANS-LIKE 3 (AHRD V1 *--- COL3_ARATH)%3B contains Interpro domain(s) IPR000315 Zinc finger%2C B-box | ch04 | + | View |
SL01G110180 | Zinc finger protein CONSTANS-LIKE 1 (AHRD V1 *--- COL1_ARATH)%3B contains Interpro domain(s) IPR000315 Zinc finger%2C B-box | ch01 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST01G047610 | Zinc finger protein CONSTANS-LIKE 1 (AHRD V1 *--- COL1_ARATH); contains Interpro domain(s) IPR000315 Zinc finger, B-box | chr01 | + | View |
ST04G034410 | Zinc finger protein CONSTANS-LIKE 3 (AHRD V1 *--- COL3_ARATH); contains Interpro domain(s) IPR000315 Zinc finger, B-box | chr04 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0008G03580 | No description available. | scaffold_8 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP5G30670 | similar to AT1G75540|STH2 (SALT TOLERANCE HOMOLOG2) | ch5-7 | + | View |
TP7G36770 | similar to AT4G39070|zinc finger (B-box type) family protein | ch7-6 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV03G06160 | name=GSVIVG01024204001; | chr3 | + | View |