Anchorpoints

Gene id
CL10G10890
Organism
Citrullus lanatus

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G23860No description available.scaffold_2-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G74990RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G19310.1); Has 4144 Blast hits to 4137 proteins in 330 species: Archae - 0; Bacteria - 0; Metazoa - 2459; Fungi - 476; Plants - 747; Viruses - 18; Other Eukaryotes - 444 (source: NCBI BLink).1-View
AT2G44410RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G58030.4); Has 1419 Blast hits to 1419 proteins in 219 species: Archae - 0; Bacteria - 0; Metazoa - 641; Fungi - 147; Plants - 430; Viruses - 10; Other Eukaryotes - 191 (source: NCBI BLink).2+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR05G04190No description available.A05+View
BR04G02460No description available.A04-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00064G00180No description available.CM3.5_scaffold00064+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G20560No description available.scaffold_2-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00356G00190No description available.scaffold00356+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0001G20730No description available.scaffold_1+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV7G01470RING finger protein 185 (probable)LG7+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM12G36960No description available.Gm12-View
GM08G16690No description available.Gm08-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD07G000260No description available.7+View
MD02G029990No description available.2-View
MD02G013340No description available.2+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G07950No description available.scaffold_2-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G22960No description available.Chr01+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G073900RING finger protein 5 (AHRD V1 *-*- B6T0C5_MAIZE)%3B contains Interpro domain(s) IPR001841 Zinc finger%2C RING-typech01+View
SL10G078900RING finger protein 5 (AHRD V1 *--- B6SUD6_MAIZE)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech10+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G027080RING finger protein 5 (AHRD V1 *-*- B4FM66_MAIZE); contains Interpro domain(s) IPR001841 Zinc finger, RING-typechr01-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G30120similar to AT1G74990|zinc finger (C3HC4-type RING finger) family proteinch5-7-View
TP5G04690similar to AT3G58030|zinc finger (C3HC4-type RING finger) family proteinch5-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV13G00670name=GSVIVG01001365001;chr13+View


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Gene id
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Description
Chromosome
Strand