Anchorpoints

Gene id
CL10G01450
Organism
Citrullus lanatus

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL8G34490No description available.scaffold_8+View
AL1G21080No description available.scaffold_1+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G20020Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the stroma ferredoxin-NADP(+)-oxidoreductase 2 ferredoxin-NADP(+)-oxidoreductase 2 (FNR2); FUNCTIONS IN: oxidoreductase activity, poly(U) RNA binding, NADPH dehydrogenase activity; INVOLVED IN: oxidation reduction, defense response to fungus, incompatible interaction, defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferredoxin Reductase (InterPro:IPR015701), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Ferredoxin--NADP reductase (InterPro:IPR012146); BEST Arabidopsis thaliana protein match is: ferredoxin-NADP(+)-oxidoreductase 1 (TAIR:AT5G66190.1); Has 6774 Blast hits to 6774 proteins in 1708 species: Archae - 20; Bacteria - 3604; Metazoa - 802; Fungi - 759; Plants - 616; Viruses - 0; Other Eukaryotes - 973 (source: NCBI BLink).1+View
AT5G66190ferredoxin-NADP(+)-oxidoreductase 1 (FNR1); FUNCTIONS IN: oxidoreductase activity, electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity, poly(U) RNA binding, NADPH dehydrogenase activity, electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity; INVOLVED IN: oxidation reduction, photosynthetic electron transport chain, defense response to bacterium; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferredoxin Reductase (InterPro:IPR015701), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Ferredoxin--NADP reductase (InterPro:IPR012146); BEST Arabidopsis thaliana protein match is: ferredoxin-NADP(+)-oxidoreductase 2 (TAIR:AT1G20020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the thylakoid. The affinity of this enzyme for ferredoxin is slightly, but significantly, higher than AtLFNR2, an isoform of the same enzyme. AtLFNR1 forms a heterodimer with AtFNR2 and is also a prerequisite to attach AtFNR2 to the thylakoid membrane. ferredoxin-NADP(+)-oxidoreductase 15-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G10680No description available.A07-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G17340No description available.Bvchr6.sca002-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00021G00720No description available.CM3.5_scaffold00021-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00006G02540No description available.supercontig_6+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G18730No description available.scaffold_1+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00017G01220No description available.scaffold00017+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV1G13600Ferredoxin--NADP reductase, chloroplastic (FNR), Precursor (putative)LG1-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM01G37051No description available.Gm01-View
GM11G08230No description available.Gm11+View
GM02G05350No description available.Gm02-View
GM16G23710No description available.Gm16-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G19420No description available.Chr09-View
GR07G19380No description available.Chr07-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD02G011340No description available.2-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06512G01150No description available.scaffold06512+View
ME07520G02650No description available.scaffold07520+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G022300leaf ferredoxin-NADP reductasechr5+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G18990No description available.scaffold_7+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G11290No description available.Chr05-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30170G05540No description available.30170+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G083810Ferredoxin--NADP reductase (AHRD V1 ***- D7MN04_ARALY)%3B contains Interpro domain(s) IPR012146 Ferredoxin--NADP reductasech02-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G027160Ferredoxin--NADP reductase (AHRD V1 ***- E5RDD5_CUCME); contains Interpro domain(s) IPR012146 Ferredoxin--NADP reductasechr02-View
ST02G009720Ferredoxin--NADP reductase (AHRD V1 ***- E5RDD5_CUCME); contains Interpro domain(s) IPR012146 Ferredoxin--NADP reductasechr02+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G01670No description available.scaffold_1-View
TC0008G04410No description available.scaffold_8+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G17790similar to AT1G20020|FNR2 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 2)ch1-1+View
TP2G30500similar to AT5G66190|FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1)ch2-4+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV04G00700name=GSVIVG01018772001;chr4+View
VV18G10740name=GSVIVG01009925001;chr18+View


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Gene id
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Description
Chromosome
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