Anchorpoints
- Gene id
- CL10G00720
- Organism
- Citrullus lanatus
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL09G11440 | No description available. | Chr9 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL8G02750 | No description available. | scaffold_8 | - | View |
AL1G33590 | No description available. | scaffold_1 | - | View |
AL7G25180 | No description available. | scaffold_7 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G32330 | heat shock transcription factor A1D Member of Heat Stress Transcription Factor (Hsf) family. Negatively regulated by HSP90.2. heat shock transcription factor A1D (HSFA1D); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to heat; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock factor 1 (TAIR:AT4G17750.1); Has 2363 Blast hits to 2344 proteins in 251 species: Archae - 0; Bacteria - 10; Metazoa - 417; Fungi - 488; Plants - 855; Viruses - 2; Other Eukaryotes - 591 (source: NCBI BLink). | 1 | - | View |
AT4G18870 | E2F/DP family winged-helix DNA-binding domain; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock factor 1 (TAIR:AT4G17750.1); Has 2839 Blast hits to 1582 proteins in 201 species: Archae - 0; Bacteria - 0; Metazoa - 505; Fungi - 454; Plants - 1509; Viruses - 0; Other Eukaryotes - 371 (source: NCBI BLink). E2F/DP family winged-helix DNA-binding domain | 4 | + | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR_00048G00340 | No description available. | scaffold00048 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR01G08980 | No description available. | A01 | - | View |
BR09G26610 | No description available. | A09 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV3G10070 | No description available. | Bvchr3.sca001 | - | View |
BV5G18000 | No description available. | Bvchr5.sca008 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00021G01420 | No description available. | CM3.5_scaffold00021 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00090G00130 | No description available. | supercontig_90 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_007G22550 | No description available. | scaffold_7 | + | View |
CRU_008G02230 | No description available. | scaffold_8 | - | View |
CRU_001G29230 | No description available. | scaffold_1 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0005G02280 | No description available. | scaffold_5 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV0G30120 | Heat shock factor protein HSF8 (HSTF 8) (probable) | scf0513178 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM01G01990 | No description available. | Gm01 | - | View |
GM09G33920 | No description available. | Gm09 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR07G03330 | No description available. | Chr07 | + | View |
GR03G18390 | No description available. | Chr03 | + | View |
GR08G22520 | No description available. | Chr08 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT5G029680 | heat shock transcription factor A3 | chr5 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_005G03480 | No description available. | scaffold_5 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT03G09500 | No description available. | Chr03 | + | View |
PT01G13890 | No description available. | Chr01 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL03G097120 | Heat stress transcription factor A3 (AHRD V1 *-** D1M7W9_SOLLC)%3B contains Interpro domain(s) IPR000232 Heat shock factor (HSF)-type%2C DNA-binding | ch03 | - | View |
SL08G005170 | Heat stress transcription factor A3 (AHRD V1 *-*- D1M7W9_SOLLC)%3B contains Interpro domain(s) IPR000232 Heat shock factor (HSF)-type%2C DNA-binding Heat shock factor protein HSF8 | ch08 | - | View |
SL08G076590 | Heat stress transcription factor A3 (AHRD V1 *-** D1M7W9_SOLLC)%3B contains Interpro domain(s) IPR000232 Heat shock factor (HSF)-type%2C DNA-binding | ch08 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST03G017770 | Heat stress transcription factor A3 (AHRD V1 *-** D1M7W9_SOLLC); contains Interpro domain(s) IPR000232 Heat shock factor (HSF)-type, DNA-binding | chr03 | - | View |
ST08G021720 | Heat stress transcription factor A3 (AHRD V1 *-** D1M7W9_SOLLC); contains Interpro domain(s) IPR000232 Heat shock factor (HSF)-type, DNA-binding | chr08 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0003G30200 | No description available. | scaffold_3 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP7G16360 | similar to AT4G17750|HSF1 (HEAT SHOCK FACTOR 1) | ch7-4 | + | View |
TP2G10600 | similar to AT5G45710|RHA1 (ROOT HANDEDNESS 1) | ch2-4 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV02G01930 | name=GSVIVG01013107001; | chr2 | + | View |