Anchorpoints

Gene id
CL09G11280
Organism
Citrullus lanatus

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G20300No description available.scaffold_4-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G32361RING/U-box superfamily protein Putative RING-H2 finger protein ATL1F precursor. ATL1F; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G35420.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).1+View
AT2G34990RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G35000.1); Has 8449 Blast hits to 8424 proteins in 270 species: Archae - 0; Bacteria - 2; Metazoa - 2244; Fungi - 529; Plants - 4596; Viruses - 25; Other Eukaryotes - 1053 (source: NCBI BLink).2-View
AT5G46650RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G17920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). RING/U-box superfamily protein5+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR09G26580No description available.A09-View
BR06G30160No description available.A06-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_008G01240No description available.scaffold_8-View
CRU_004G16510No description available.scaffold_4-View
CRU_001G29310No description available.scaffold_1+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0005G02490No description available.scaffold_5-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G33830Probable RING-H2 finger protein ATL5GLG5+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM09G33800No description available.Gm09+View
GM01G02130No description available.Gm01+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G22570No description available.Chr08+View
GR06G21730No description available.Chr06-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G066740zinc finger C C3HC4 type (RING finger) proteinchr8+View
MT5G030010RING-H2 zinc finger proteinchr5-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G14090No description available.Chr01+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30068G01200No description available.30068-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL08G005110Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech08-View
SL08G076800Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech08+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST08G021430RING finger protein (AHRD V1 *-*- C6EUD3_SOYBN); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr08+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G21260similar to AT1G23980|zinc finger (C3HC4-type RING finger) family proteinch1-1-View
TP2G11480similar to AT5G46650|zinc finger (C3HC4-type RING finger) family proteinch2-4+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV02G02190name=GSVIVG01013145001;chr2+View


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Gene id
Species
Description
Chromosome
Strand