Anchorpoints

Gene id
CL06G04630
Organism
Citrullus lanatus

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G16810pumilio 24 pumilio 24 (PUM24); FUNCTIONS IN: RNA binding, binding; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 5 (TAIR:AT3G20250.1); Has 2337 Blast hits to 1306 proteins in 237 species: Archae - 0; Bacteria - 1; Metazoa - 1209; Fungi - 478; Plants - 404; Viruses - 0; Other Eukaryotes - 245 (source: NCBI BLink). Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.3-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR05G26600No description available.A05+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV3G08710No description available.Bvchr3.sca001+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00047G01690No description available.CM3.5_scaffold00047+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00009G01100No description available.supercontig_9+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G15740No description available.scaffold_3-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00016G00720No description available.scaffold00016-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV4G14070Pumilio domain-containing protein KIAA0020 homolog (probable)LG4-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM07G37330No description available.Gm07+View
GM17G03290No description available.Gm17-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR06G07720No description available.Chr06-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD13G014780No description available.13+View
MD16G011750No description available.16+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME01945G00490No description available.scaffold01945+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G120460transmembrane protein C putativechr4-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G61560No description available.3-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G12130No description available.scaffold_1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G00560No description available.Chr10+View
PT08G21140No description available.Chr08-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29726G02120No description available.29726-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G065580Pumilio domain-containing protein KIAA0020 (AHRD V1 ***- B5X3V8_SALSA)%3B contains Interpro domain(s) IPR011989 Armadillo-like helicalch01-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G29210No description available.scaffold_4-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G15060similar to AT3G16810|APUM24 (Arabidopsis Pumilio 24)ch3-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV05G12290name=GSVIVG01035090001;chr5+View


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Gene id
Species
Description
Chromosome
Strand