Anchorpoints

Gene id
CL05G06340
Organism
Citrullus lanatus

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CL06G05400No description available.Chr6-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G06360No description available.scaffold_3+View
AL6G19040No description available.scaffold_6-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G06300Encodes a prolyl-4 hydroxylase that can hydroxylate poly(L-proline)and other proline rich peptides, including those with sequences corresponding to those in arabinogalactan proteins and extensins. P4H isoform 2 (AT-P4H-2); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, procollagen-proline 4-dioxygenase activity; INVOLVED IN: peptidyl-proline hydroxylation to 4-hydroxy-L-proline; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123), Metridin-like ShK toxin (InterPro:IPR003582); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G18900.1); Has 2500 Blast hits to 2478 proteins in 341 species: Archae - 0; Bacteria - 386; Metazoa - 1038; Fungi - 78; Plants - 408; Viruses - 17; Other Eukaryotes - 573 (source: NCBI BLink). P4H isoform 23+View
AT5G189002-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123), Metridin-like ShK toxin (InterPro:IPR003582); BEST Arabidopsis thaliana protein match is: P4H isoform 2 (TAIR:AT3G06300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein5-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00019G04570No description available.scaffold00019+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G34230No description available.A02+View
BR10G15890No description available.A10+View
BR02G09230No description available.A02-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00006G06960No description available.CM3.5_scaffold00006+View
CM00047G02570No description available.CM3.5_scaffold00047-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00016G00830No description available.supercontig_16+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G05490No description available.scaffold_3+View
CRU_006G16770No description available.scaffold_6-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00011G02230No description available.scaffold00011+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0008G29580No description available.scaffold_8+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV4G11350Prolyl 4-hydroxylase subunit alpha-1, Precursor (probable)LG4+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM15G10670No description available.Gm15-View
GM17G02430No description available.Gm17+View
GM07G38330No description available.Gm07-View
GM13G28380No description available.Gm13+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR11G18280No description available.Chr11+View
GR06G25650No description available.Chr06+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ6G023930No description available.chr6+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD16G013100No description available.16-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME01551G02940No description available.scaffold01551+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G118560prolyl 4-hydroxylase subunit alpha-like proteinchr4+View
MT2G020800prolyl 4-hydroxylase subunit alpha-like proteinchr2-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G13780No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G02720No description available.Chr10-View
PT08G19770No description available.Chr08-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29726G00650No description available.29726+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G080530Prolyl 4-hydroxylase alpha subunit-like protein (AHRD V1 ***- Q8LAN3_ARATH)%3B contains Interpro domain(s) IPR006620 Prolyl 4-hydroxylase%2C alpha subunitch01+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G022480Prolyl 4-hydroxylase alpha subunit-like protein (AHRD V1 ***- Q8LAN3_ARATH); contains Interpro domain(s) IPR006620 Prolyl 4-hydroxylase, alpha subunitchr01-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G27550No description available.scaffold_4+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G25490similar to AT5G18900|oxidoreductase, 2OG-Fe(II) oxygenase family proteinch6-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV05G03770name=GSVIVG01017841001;chr5-View


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Description
Chromosome
Strand