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Functional clusters
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BLAST
WorkbenchAnchorpoints
- Gene id
- CL05G05830
- Organism
- Citrullus lanatus
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL06G05850 | No description available. | Chr6 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL3G05970 | No description available. | scaffold_3 | - | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT3G05960 | sugar transporter 6 (STP6); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, monosaccharide transmembrane transporter activity; INVOLVED IN: carbohydrate transmembrane transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G26250.1); Has 24729 Blast hits to 24248 proteins in 1903 species: Archae - 447; Bacteria - 10610; Metazoa - 3461; Fungi - 6515; Plants - 2500; Viruses - 0; Other Eukaryotes - 1196 (source: NCBI BLink). sugar transporter 6 Encodes a hexose sugar transporter that is expressed in pollen. STP6 may play a role in providing sugars during late pollen maturation or pollen tube germination. | 3 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR03G30220 | No description available. | A03 | - | View |
| BR02G33890 | No description available. | A02 | - | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00006G06450 | No description available. | CM3.5_scaffold00006 | - | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00011G01060 | No description available. | scaffold00011 | + | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0008G28650 | No description available. | scaffold_8 | + | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM10G39500 | No description available. | Gm10 | + | View |
| GM20G28220 | No description available. | Gm20 | - | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR06G23740 | No description available. | Chr06 | + | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD16G014150 | No description available. | 16 | - | View |
| MD13G018110 | No description available. | 13 | - | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME01551G02270 | No description available. | scaffold01551 | + | View |
| ME02912G00330 | No description available. | scaffold02912 | + | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT1G104750 | sugar porter (SP) family MFS transporter | chr1 | + | View |
| MT4G116770 | hexose transporter C putative | chr4 | + | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_001G14790 | No description available. | scaffold_1 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT10G08980 | No description available. | Chr10 | + | View |
| PT08G15070 | No description available. | Chr08 | + | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC29844G02110 | No description available. | 29844 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL09G075820 | Solute carrier family 2%2C facilitated glucose transporter member 3 (AHRD V1 ***- GTR3_CANFA)%3B contains Interpro domain(s) IPR003663 Sugar/inositol transporter | ch09 | - | View |
| SL06G054270 | Solute carrier family 2%2C facilitated glucose transporter member 5 (AHRD V1 ***- GTR5_BOVIN)%3B contains Interpro domain(s) IPR003663 Sugar/inositol transporter | ch06 | - | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST09G023360 | Sugar transport protein (AHRD V1 **-- C3SAC9_BRADI); contains Interpro domain(s) IPR005828 General substrate transporter | chr09 | - | View |
| ST03G005360 | Solute carrier family 2, facilitated glucose transporter member 5 (AHRD V1 ***- GTR5_BOVIN); contains Interpro domain(s) IPR003663 Sugar/inositol transporter | chr03 | + | View |
| ST06G018030 | Solute carrier family 2, facilitated glucose transporter member 5 (AHRD V1 ***- GTR5_BOVIN); contains Interpro domain(s) IPR003663 Sugar/inositol transporter | chr06 | - | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0004G23080 | No description available. | scaffold_4 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP3G04890 | similar to AT3G05960|STP6 (SUGAR TRANSPORTER 6) | ch3-1 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV05G04590 | name=GSVIVG01017935001; | chr5 | + | View |