Anchorpoints

Gene id
CL04G05370
Organism
Citrullus lanatus

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G03430No description available.scaffold_3+View
AL6G18180No description available.scaffold_6+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G18170Encodes the 43 kDa alpha-subunit of the glutamate dehydrogenase with a putative mitochondrial transit polypeptide and NAD(H)- and alpha-ketoglutarate-binding domains. Mitochondrial localization confirmed by subcellular fractionation. Combines in several ratios with GDH2 protein (GDH-beta) to form seven isoenzymes. Catalyzes the cleavage of glycine residues. May be involved in ammonia assimilation under conditions of inorganic nitrogen excess. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells. glutamate dehydrogenase 1 glutamate dehydrogenase 1 (GDH1); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cadmium ion, response to salt stress, nitrogen compound metabolic process, response to absence of light; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), NAD(P)-binding domain (InterPro:IPR016040), Glutamate dehydrogenase (InterPro:IPR014362), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 3 (TAIR:AT3G03910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5+View
AT3G03910glutamate dehydrogenase 3 glutamate dehydrogenase 3 (GDH3); FUNCTIONS IN: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor, oxidoreductase activity, binding, catalytic activity; INVOLVED IN: regulation of nitrogen compound metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), Glutamate dehydrogenase (InterPro:IPR014362), NAD(P)-binding domain (InterPro:IPR016040), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 1 (TAIR:AT5G18170.1); Has 8937 Blast hits to 8931 proteins in 2306 species: Archae - 305; Bacteria - 5351; Metazoa - 356; Fungi - 208; Plants - 399; Viruses - 0; Other Eukaryotes - 2318 (source: NCBI BLink). GDH3 encodes a member of the glutamate dehydrogenease family. Its expression is upregulated in response to cytokinin and it may play a role in the control of nitrogen metabolism in leaf development.3+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR10G16420No description available.A10-View
BR02G40080No description available.A02+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV3G06320No description available.Bvchr3.sca005+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00010G00190No description available.CM3.5_scaffold00010-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00051G01170No description available.supercontig_51-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G02990No description available.scaffold_3+View
CRU_006G16050No description available.scaffold_6+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00117G00330No description available.scaffold00117+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0001G17450No description available.scaffold_1-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV1G23400Glutamate dehydrogenase 1 (GDH 1) (putative)LG1+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM16G26940No description available.Gm16-View
GM16G04560No description available.Gm16+View
GM19G28770No description available.Gm19-View
GM02G07940No description available.Gm02-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ1G054290No description available.chr1-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02431G00580No description available.scaffold02431+View
ME03614G02320No description available.scaffold03614-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G085630NADP-specific glutamate dehydrogenasechr7+View
MT6G029460NADP-specific glutamate dehydrogenasechr6+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G03060No description available.scaffold_7+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT13G05830No description available.Chr13+View
PT19G03480No description available.Chr19-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29950G00150No description available.29950+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL10G078550Glutamate dehydrogenase (AHRD V1 **** Q8L6A0_TOBAC)%3B contains Interpro domain(s) IPR014362 Glutamate dehydrogenase Glutamate dehydrogenasech10-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST10G020460Glutamate dehydrogenase (AHRD V1 ***- Q8L6A0_TOBAC); contains Interpro domain(s) IPR014362 Glutamate dehydrogenasechr10+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0005G29280No description available.scaffold_5-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G26150similar to AT5G18170|GDH1 (GLUTAMATE DEHYDROGENASE 1)ch6-6-View
TP3G02880similar to AT3G03910|GDH3 (GLUTAMATE DEHYDROGENASE 3)ch3-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV08G08440name=GSVIVG01033402001;chr8+View


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Description
Chromosome
Strand