Anchorpoints

Gene id
CL01G18380
Organism
Citrullus lanatus

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G02740No description available.scaffold_7-View
AL4G02120No description available.scaffold_4-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G37880LisH/CRA/RING-U-box domains-containing protein LisH/CRA/RING-U-box domains-containing protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein, CRA domain (InterPro:IPR019589), Zinc finger, RING-type (InterPro:IPR001841), CTLH, C-terminal LisH motif (InterPro:IPR006595), LisH dimerisation motif (InterPro:IPR006594), Ran binding protein-like, CRA domain (InterPro:IPR013144); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT2G22690.2); Has 833 Blast hits to 829 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 364; Fungi - 234; Plants - 138; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink).4+View
AT2G22690zinc ion binding zinc ion binding; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), CTLH, C-terminal LisH motif (InterPro:IPR006595), LisH dimerisation motif (InterPro:IPR006594), Ran binding protein-like, CRA domain (InterPro:IPR013144); BEST Arabidopsis thaliana protein match is: LisH/CRA/RING-U-box domains-containing protein (TAIR:AT4G37880.1); Has 761 Blast hits to 757 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 327; Fungi - 206; Plants - 137; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink).2-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00033G00050No description available.scaffold00033+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR01G01090No description available.A01-View
BR08G19210No description available.A08+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00007G07170No description available.CM3.5_scaffold00007+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00129G00250No description available.supercontig_129-View
CP00020G00560No description available.supercontig_20-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_007G02200No description available.scaffold_7-View
CRU_004G01740No description available.scaffold_4-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00023G00270No description available.scaffold00023+View
CS00006G00220No description available.scaffold00006-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0008G19300No description available.scaffold_8+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G20710LisH domain-containing protein C29A3.03c (probable)scf0513160+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM13G32690No description available.Gm13+View
GM15G06630No description available.Gm15-View
GM01G23830No description available.Gm01+View
GM08G37050No description available.Gm08+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR11G10890No description available.Chr11+View
GR03G03550No description available.Chr03+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME09335G00090No description available.scaffold09335+View
ME02969G00180No description available.scaffold02969+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G067470LisH/CRA/RING-U-box proteinchr8+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G21970No description available.scaffold_6-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT09G08050No description available.Chr09-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC28179G00090No description available.28179-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G091720Macrophage erythroblast attacher (AHRD V1 **-- C5FFR8_NANOT)%3B contains Interpro domain(s) IPR013144 Ran binding protein-like%2C CRA domainch02-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G030230Macrophage erythroblast attacher (AHRD V1 **-- E4V347_ARTGP); contains Interpro domain(s) IPR013144 Ran binding protein-like, CRA domainchr02-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G07960No description available.scaffold_1+View
TC0002G03540No description available.scaffold_2+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G35520similar to AT4G37880|protein binding / zinc ion bindingch7-6+View


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Gene id
Species
Description
Chromosome
Strand