Anchorpoints

Gene id
CL00G05500
Organism
Citrullus lanatus

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G05180No description available.scaffold_2+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G10670One of the three genes encoding subunit A of the trimeric protein ATP Citrate Lyase. Antisense ACLA-1 plants cause a reduction in cytosolic acetyl-CoA metabolism and have upregulation of stress-related genes and down-regulation of primary metabolism and growth genes, suggesting the mutation restricts normal growth and developmental processes and puts the plant into a state of stress. ATP-citrate lyase A-1 (ACLA-1); CONTAINS InterPro DOMAIN/s: ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-2 (TAIR:AT1G60810.1). ATP-citrate lyase A-11+View
AT1G60810ATP-citrate lyase A-2 ATP-citrate lyase A-2 (ACLA-2); CONTAINS InterPro DOMAIN/s: ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4); Has 5556 Blast hits to 5555 proteins in 1577 species: Archae - 133; Bacteria - 3078; Metazoa - 348; Fungi - 198; Plants - 97; Viruses - 0; Other Eukaryotes - 1702 (source: NCBI BLink). One of the three genes encoding subunit A of the trimeric enzyme ATP Citrate lyase1-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00096G00070No description available.scaffold00096-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G09570No description available.Bvchr6.sca027-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00014G00160No description available.CM3.5_scaffold00014+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00069G00720No description available.supercontig_69+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G04270No description available.scaffold_2+View
CRU_001G09710No description available.scaffold_1+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00003G02280No description available.scaffold00003-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G27330No description available.scaffold_2-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G07160ATP-citrate synthase (probable)scf0513158+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM01G03530No description available.Gm01-View
GM02G04120No description available.Gm02+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G15990No description available.Chr08+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ2G024590No description available.chr2+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD13G006870No description available.13+View
MD16G005460No description available.16+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03055G00180No description available.scaffold03055+View
ME03823G00270No description available.scaffold03823+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G033920ATP-citrate synthase alpha chain proteinchr5-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G26090No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G04270No description available.Chr10+View
PT08G18890No description available.Chr08-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29631G00570No description available.29631+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G25460No description available.scaffold_2+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G03900similar to AT1G60810|ACLA-2ch2-2+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G11580name=GSVIVG01013785001;chr1-View


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Description
Chromosome
Strand