Anchorpoints

Gene id
BV5G05170
Organism
Beta vulgaris

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G19360No description available.scaffold_1+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G18450actin-related protein 4 actin-related protein 4 (ARP4); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: long-day photoperiodism, flowering, chromatin organization, pollen sperm cell differentiation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: actin-11 (TAIR:AT3G12110.1); Has 13669 Blast hits to 13362 proteins in 2792 species: Archae - 2; Bacteria - 480; Metazoa - 5593; Fungi - 3430; Plants - 1457; Viruses - 2; Other Eukaryotes - 2705 (source: NCBI BLink). Encodes a gene similar to actin-related proteins in other organisms. Member of nuclear ARP family of genes. Component of chromatin remodeling complexes, involved in chromatin-mediated gene regulation. Phenotype of the arp4-1 mutant allele revealed partial sterility due to defects in anther development. Targeting the distinct, 3' UTR of AtARP4 transcripts with RNA interference caused a drastic reduction in the level of AtARP4 protein expression, and resulted in strong pleiotropic phenotypes such as altered organization of plant organs, early flowering, delayed flower senescence and high levels of sterility. Western blot analysis and immunolabelling demonstrated a clear correlation between reductions in the level of AtARP4 expression and severity of the phenotypes.1+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL06G15490No description available.Chr6+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G19510No description available.scaffold_2+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G06080No description available.scaffold_2-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM08G04490No description available.Gm08-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G29110similar to AT1G18450|ATARP4ch5-7+View
TP1G16390similar to AT1G18450|ATARP4ch1-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV17G05730name=GSVIVG01008255001;chr17+View


Download

Gene id
Species
Description
Chromosome
Strand