Anchorpoints

Gene id
BV0G70180
Organism
Beta vulgaris

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G22760No description available.scaffold_3-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G20740Transducin/WD40 repeat-like superfamily protein FERTILIZATION-INDEPENDENT ENDOSPERM (FIE); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: structural molecules (TAIR:AT1G79990.1); Has 16392 Blast hits to 11301 proteins in 524 species: Archae - 16; Bacteria - 2767; Metazoa - 5614; Fungi - 4038; Plants - 1850; Viruses - 0; Other Eukaryotes - 2107 (source: NCBI BLink). Encodes a protein similar to the transcriptional regular of the animal Polycomb group and is involved in regulation of establishment of anterior-posterior polar axis in the endosperm and repression of flowering during vegetative phase. Mutation leads endosperm to develop in the absence of fertilization and flowers to form in seedlings and non-reproductive organs. Also exhibits maternal effect gametophytic lethal phenotype, which is suppressed by hypomethylation. Forms part of a large protein complex that can include VRN2 (VERNALIZATION 2), VIN3 (VERNALIZATION INSENSITIVE 3) and polycomb group proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE), CURLY LEAF (CLF) and SWINGER (SWN or EZA1). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization. In the ovule, the FIE transcript levels increase transiently just after fertilization.3-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR05G22860No description available.A05+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G16140No description available.Chr5-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00032G00660No description available.CM3.5_scaffold00032-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00097G00670No description available.supercontig_97+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G19750No description available.scaffold_3-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00152G00040No description available.scaffold00152-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G29070No description available.scaffold_6-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV3G23780Polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM (similar to)LG3-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM13G36310No description available.Gm13-View
GM12G34241No description available.Gm12+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR13G16390No description available.Chr13+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD03G017920No description available.3+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03241G00810No description available.scaffold03241+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_004G19390No description available.scaffold_4-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G41730No description available.Chr01-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC28166G00250No description available.28166-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL07G064090Fertilization-independent endosperm protein (AHRD V1 **-- B0LUT0_SOLLC)%3B contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat%2C regionch07-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST07G026170Fertilization-independent endosperm protein (AHRD V1 **-- A7X6G2_SOLTU); contains Interpro domain(s) IPR019782 WD40 repeat 2 IPR019775 WD40 repeat, conserved site IPR017986 WD40 repeat, regionchr07+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G18760similar to AT3G20740|FIE (FERTILIZATION-INDEPENDENT ENDOSPERM)ch3-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV19G05030name=GSVIVG01014605001;chr19-View


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Gene id
Species
Description
Chromosome
Strand