Anchorpoints

Gene id
BR10G28860
Organism
Brassica rapa

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL5G25840No description available.scaffold_5-View
AL6G01130No description available.scaffold_6+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G55660ROP (rho of plants) guanine nucleotide exchange factor 6 ROP (rho of plants) guanine nucleotide exchange factor 6 (ROPGEF6); FUNCTIONS IN: Rho guanyl-nucleotide exchange factor activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: ROP guanine nucleotide exchange factor 5 (TAIR:AT5G05940.1); Has 306 Blast hits to 304 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 304; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.3-View
AT5G02010RHO guanyl-nucleotide exchange factor 7 (ROPGEF7); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: ROP guanine nucleotide exchange factor 5 (TAIR:AT5G05940.1); Has 310 Blast hits to 307 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 308; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). RHO guanyl-nucleotide exchange factor 7 Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.5+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL11G00830No description available.Chr11-View
CL04G07610No description available.Chr4+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00002G01300No description available.CM3.5_scaffold00002-View
CM00008G02010No description available.CM3.5_scaffold00008-View
CM00011G01360No description available.CM3.5_scaffold00011+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G00820No description available.scaffold_6+View
CRU_005G21080No description available.scaffold_5-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00002G06200No description available.scaffold00002-View
CS00083G00270No description available.scaffold00083-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0007G23850No description available.scaffold_7-View
EG0002G22290No description available.scaffold_2-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G11920Rop guanine nucleotide exchange factor 1 (RopGEF1) (similar to)LG6+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM14G06930No description available.Gm14+View
GM01G26010No description available.Gm01-View
GM18G41330No description available.Gm18-View
GM07G16790No description available.Gm07-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR11G27430No description available.Chr11-View
GR12G10870No description available.Chr12-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD12G016310No description available.12-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02943G00700No description available.scaffold02943-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS05G38000ATROPGEF7%2FROPGEF7, putative, expressed5+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G27210No description available.scaffold_6-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT16G10440No description available.Chr16-View
PT06G09260No description available.Chr06-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G011480Rop guanine nucleotide exchange factor 1 (AHRD V1 ***- ROGF1_ARATH)%3B contains Interpro domain(s) IPR005512 Rop nucleotide exchanger%2C PRONEch09-View
SL10G086660Rop guanine nucleotide exchange factor 1 (AHRD V1 ***- ROGF1_ARATH)%3B contains Interpro domain(s) IPR005512 Rop nucleotide exchanger%2C PRONEch10-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST10G027890Rop guanine nucleotide exchange factor (AHRD V1 *--- E5GCE7_CUCME); contains Interpro domain(s) IPR005512 Rop nucleotide exchanger, PRONEchr10+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0005G02760No description available.scaffold_5+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G06810similar to AT3G55660|ROPGEF6ch5-1+View
TP6G40430similar to AT5G02010|ROPGEF7ch6-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV08G13710name=GSVIVG01034063001;chr8-View


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Gene id
Species
Description
Chromosome
Strand