Anchorpoints

Gene id
BR10G19610
Organism
Brassica rapa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BR06G31690No description available.A06+View
BR03G06420No description available.A03-View
BR02G07470No description available.A02-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G15310No description available.scaffold_6-View
AL3G01110No description available.scaffold_3-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G15490UDP-glucose 6-dehydrogenase family protein Encodes one of four UDP-glucose dehydrogenase UGD) genes. Mutation of this gene in combination with UGD2 leads to swollen plant cell walls and severe developmental defects associated with changes in pectic polysaccharides. UDP-glucose 6-dehydrogenase family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cytosol, cell wall, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, N-terminal (InterPro:IPR001732), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose/GDP-mannose dehydrogenase, dimerisation (InterPro:IPR014026), Nucleotide sugar dehydrogenase (InterPro:IPR017476); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT3G29360.2); Has 13373 Blast hits to 13344 proteins in 2170 species: Archae - 309; Bacteria - 7111; Metazoa - 214; Fungi - 99; Plants - 213; Viruses - 14; Other Eukaryotes - 5413 (source: NCBI BLink).5-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00014G01610No description available.supercontig_14-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G01100No description available.scaffold_3-View
CRU_006G13320No description available.scaffold_6-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00015G02400No description available.scaffold00015-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G12050No description available.scaffold_10+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM19G03500No description available.Gm19-View
GM08G26520UDP-glucose 6-dehydrogenase 1Gm08-View
GM18G50000UDP-glucose 6-dehydrogenase 1Gm18-View
GM13G06050No description available.Gm13-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G08180No description available.Chr07-View
GR08G17790No description available.Chr08+View
GR01G07790No description available.Chr01+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ2G017610No description available.chr2-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06609G00370No description available.scaffold06609+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G012950UDP-glucose 6-dehydrogenase family proteinchr7-View
MT6G014530UDP-glucose 6-dehydrogenase C putativechr6-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G55070UDP-glucose 6-dehydrogenase 3 UDP-glucose 6-dehydrogenase, putative, expressed3+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_003G23690No description available.scaffold_3+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT04G11860No description available.Chr04-View
PT17G09200No description available.Chr17-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G069550UDP-D-glucose dehydrogenase (AHRD V1 **** D2WK27_GOSHI)%3B contains Interpro domain(s) IPR014028 UDP-glucose/GDP-mannose dehydrogenase%2C dimerisation and substrate-bindingch06+View
SL02G088690UDP-glucose 6-dehydrogenase (AHRD V1 **** B6TBY8_MAIZE)%3B contains Interpro domain(s) IPR001732 UDP-glucose/GDP-mannose dehydrogenase%2C N-terminalch02-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G034190UDP-glucose 6-dehydrogenase (AHRD V1 ***- B6TBY8_MAIZE); contains Interpro domain(s) IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminalchr02+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G09670No description available.scaffold_4-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G02670similar to AT5G39320|UDP-glucose 6-dehydrogenase, putativech7-1-View
TP6G28610similar to AT5G15490|UDP-glucose 6-dehydrogenase, putativech6-6+View
TP3G01120similar to AT5G15490|UDP-glucose 6-dehydrogenase, putativech3-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV14G02960name=GSVIVG01011507001;chr14-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM05G03990LOC1002828475+View


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Gene id
Species
Description
Chromosome
Strand