Anchorpoints
- Gene id
- BR10G19410
- Organism
- Brassica rapa
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR05G35690 | No description available. | A05 | - | View |
BR03G06600 | No description available. | A03 | + | View |
BR07G22480 | No description available. | A07 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL6G15620 | No description available. | scaffold_6 | + | View |
AL3G01400 | No description available. | scaffold_3 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G15790 | RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G02290.1); Has 5281 Blast hits to 5274 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 1803; Fungi - 302; Plants - 2328; Viruses - 9; Other Eukaryotes - 839 (source: NCBI BLink). | 5 | + | View |
AT3G02290 | RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G15790.2); Has 5868 Blast hits to 5858 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 1823; Fungi - 365; Plants - 2709; Viruses - 17; Other Eukaryotes - 952 (source: NCBI BLink). RING/U-box superfamily protein | 3 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV2G08450 | No description available. | Bvchr2.sca001 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00051G00940 | No description available. | CM3.5_scaffold00051 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_003G01320 | No description available. | scaffold_3 | + | View |
CRU_006G13610 | No description available. | scaffold_6 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00015G00410 | No description available. | scaffold00015 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM19G04340 | No description available. | Gm19 | - | View |
GM13G06840 | No description available. | Gm13 | - | View |
GM08G27730 | No description available. | Gm08 | - | View |
GM18G50945 | No description available. | Gm18 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR01G20710 | No description available. | Chr01 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME04043G01700 | No description available. | scaffold04043 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_003G22810 | No description available. | scaffold_3 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT17G10010 | No description available. | Chr17 | - | View |
PT04G11480 | No description available. | Chr04 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL02G065720 | RING finger protein 13 (AHRD V1 *-*- RNF13_MOUSE)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch02 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST02G033640 | Zinc finger family protein (AHRD V1 **-* D7KZF4_ARALY); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type | chr02 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0004G11080 | No description available. | scaffold_4 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G28330 | similar to AT5G15790|zinc finger (C3HC4-type RING finger) family protein | ch6-6 | - | View |
TP3G01350 | similar to AT3G02290|zinc finger (C3HC4-type RING finger) family protein | ch3-1 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV14G16070 | name=GSVIVG01036545001; | chr14 | + | View |