Anchorpoints

Gene id
BR10G14010
Organism
Brassica rapa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BR03G09380No description available.A03+View
BR02G10780No description available.A02+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G21590No description available.scaffold_6+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G21990Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-type peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT5G48570.1); Has 3652 Blast hits to 3437 proteins in 299 species: Archae - 17; Bacteria - 74; Metazoa - 1859; Fungi - 377; Plants - 620; Viruses - 0; Other Eukaryotes - 705 (source: NCBI BLink). Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808). Functions as a chaperone receptor at the chloroplast outer envelope, mediating Hsp70-dependent protein targeting to chloroplasts. It has been localized to the ER membrane, interacts with the Sec translocon, and has a potential function in post-translational protein transport into the ER.5+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00004G01630No description available.scaffold00004+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV7G04280No description available.Bvchr7.sca021-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL02G24090No description available.Chr2+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00103G00440No description available.supercontig_103+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G19110No description available.scaffold_6+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G05190No description available.scaffold_10-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV3G4067070 kDa peptidyl-prolyl isomerase (PPIase) (probable)LG3+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G08180No description available.Chr09-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G15220No description available.scaffold_6-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G073840Peptidyl-prolyl cis-trans isomerase D (AHRD V1 *--- PPID_HUMAN)%3B contains Interpro domain(s) IPR011990 Tetratricopeptide-like helicalch06+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST06G030310Peptidyl-prolyl cis-trans isomerase D (AHRD V1 *--- E5KN59_HUMAN); contains Interpro domain(s) IPR011990 Tetratricopeptide-like helicalchr06-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G23200similar to AT5G21990|tetratricopeptide repeat (TPR)-containing proteinch6-6-View


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Gene id
Species
Description
Chromosome
Strand