Anchorpoints
- Gene id
- BR09G53450
- Organism
- Brassica rapa
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR10G03240 | No description available. | A10 | - | View |
BR03G16670 | No description available. | A03 | - | View |
BR01G08140 | No description available. | A01 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL4G18530 | No description available. | scaffold_4 | - | View |
AL1G03950 | No description available. | scaffold_1 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G33310 | auxin-induced protein 13 Auxin induced gene, IAA13 (IAA13). auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 2413 Blast hits to 2412 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2412; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | 2 | - | View |
AT4G29080 | phytochrome-associated protein 2 (PAP2) phytochrome-associated protein 2 phytochrome-associated protein 2 (PAP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of translation; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 8 (TAIR:AT2G22670.4); Has 2237 Blast hits to 2234 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 2235; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | 4 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL05G04230 | No description available. | Chr5 | - | View |
CL06G07150 | No description available. | Chr6 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00006G04720 | No description available. | CM3.5_scaffold00006 | - | View |
CM00057G00780 | No description available. | CM3.5_scaffold00057 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR06G25090 | No description available. | Chr06 | - | View |
GR07G15000 | No description available. | Chr07 | + | View |
GR04G22250 | No description available. | Chr04 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME01551G00420 | No description available. | scaffold01551 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT10G06520 | No description available. | Chr10 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G03380 | similar to AT1G04550|IAA12 (AUXIN-INDUCED PROTEIN 12) | ch1-1 | + | View |
TP4G15620 | similar to AT2G33310|IAA13 | ch4-6 | - | View |
TP7G27020 | similar to AT4G29080|PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2) | ch7-5 | - | View |