Anchorpoints

Gene id
BR09G39450
Organism
Brassica rapa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BR07G16320No description available.A07+View
BR04G01800No description available.A04-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL5G30350No description available.scaffold_5+View
AL4G31440No description available.scaffold_4+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G43810Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT3G59810.1); Has 1180 Blast hits to 1180 proteins in 300 species: Archae - 305; Bacteria - 0; Metazoa - 337; Fungi - 255; Plants - 126; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). Small nuclear ribonucleoprotein family protein2+View
AT3G59810Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT2G43810.2); Has 1159 Blast hits to 1159 proteins in 301 species: Archae - 313; Bacteria - 0; Metazoa - 297; Fungi - 260; Plants - 135; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink). Small nuclear ribonucleoprotein family protein3+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV3G14330No description available.Bvchr3.sca006+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G25130No description available.scaffold_5+View
CRU_004G25370No description available.scaffold_4+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0012G00270No description available.scaffold_12+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV1G02220U6 snRNA-associated Sm-like protein LSm6 (similar to)LG1+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR06G23270No description available.Chr06+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD15G008220No description available.15-View
MD02G001140No description available.2-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G28370No description available.scaffold_7+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G16700No description available.scaffold_4-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G03330similar to AT3G59810|small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putativech5-1-View
TP4G25890similar to AT2G43810|small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putativech4-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV05G13610name=GSVIVG01038197001;chr5+View


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Gene id
Species
Description
Chromosome
Strand