Anchorpoints

Gene id
BR09G37210
Organism
Brassica rapa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BR04G03380No description available.A04-View
BR03G20550No description available.A03+View
BR05G01810No description available.A05+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G27760No description available.scaffold_4+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G56580RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger C1A (TAIR:AT2G40830.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). RING/U-box superfamily protein Encodes a functional E3 ubiquitin ligase involved in the dehydration stress response and regulation of proline biosynthesis.3+View
AT2G40830RING-H2 finger C1A Encodes a putative RING-H2 finger protein RHC1a. RING-H2 finger C1A (RHC1A); FUNCTIONS IN: zinc ion binding; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G56580.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).2+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL04G05930No description available.Chr4+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00036G01090No description available.CM3.5_scaffold00036+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G22380No description available.scaffold_4+View
CRU_005G22020No description available.scaffold_5+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0011G10870No description available.scaffold_11+View
EG0011G14010No description available.scaffold_11-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS12G02620zinc finger, C3HC4 type domain containing protein, expressed12+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT06G03210No description available.Chr06-View
PT16G02930No description available.Chr16-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G05980similar to AT3G56580|zinc finger (C3HC4-type RING finger) family proteinch5-1-View
TP4G23160similar to AT2G40830|RHC1Ach4-6+View


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Gene id
Species
Description
Chromosome
Strand