Anchorpoints

Gene id
BR09G22430
Organism
Brassica rapa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BR06G36400No description available.A06+View
BR03G43970No description available.A03+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G25350No description available.scaffold_7-View
AL8G00870No description available.scaffold_8+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G17600Encodes Lil3:1 (light-harvesting-like) protein. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. A generic LHC motif is present in Lil3:1. Chlorophyll A-B binding family protein LIL3:1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT5G47110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).4+View
AT5G47110Chlorophyll A-B binding family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis, light harvesting; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT4G17600.1); Has 86 Blast hits to 86 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 79; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). Chlorophyll A-B binding family protein5-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV5G22580No description available.Bvchr5.sca004+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00021G02140No description available.CM3.5_scaffold00021-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_007G22740No description available.scaffold_7-View
CRU_008G00670No description available.scaffold_8+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00095G00270No description available.scaffold00095-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0005G03220No description available.scaffold_5-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM05G05450No description available.Gm05+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G23110No description available.Chr08-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD06G004850No description available.6-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME11581G01230No description available.scaffold11581+View
ME11341G00610No description available.scaffold11341+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G099330light harvesting-like proteinchr4-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G08350No description available.Chr03+View
PT01G15130No description available.Chr01-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL08G007180Light harvesting-like protein 3 (AHRD V1 **-- A9P991_POPTR)ch08-View
SL08G077880Light harvesting-like protein 3 (AHRD V1 **-- B9N2V9_POPTR)ch08-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST08G006020Light harvesting-like protein 3 (AHRD V1 **-- B9N2V9_POPTR)chr08+View
ST08G023430Light harvesting-like protein 3 (AHRD V1 **-- B9N2V9_POPTR)chr08-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0003G23830No description available.scaffold_3-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G11920similar to AT5G47110|lil3 protein, putativech2-4-View
TP7G16560similar to AT4G17600|LIL3:1ch7-4-View


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Gene id
Species
Description
Chromosome
Strand