Anchorpoints

Gene id
BR09G22330
Organism
Brassica rapa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BR06G36290No description available.A06-View
BR08G10970No description available.A08-View
BR01G08770No description available.A01-View
BR02G29390No description available.A02-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL8G00690No description available.scaffold_8-View
AL7G25490No description available.scaffold_7-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G17490ethylene responsive element binding factor 6 Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-6). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. It is involved in the response to reactive oxygen species and light stress. ethylene responsive element binding factor 6 (ERF6); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 5 (TAIR:AT5G47230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).4-View
AT5G47220Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC box?dependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation. ethylene responsive element binding factor 2 (ERF2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 1 (TAIR:AT4G17500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ethylene responsive element binding factor 25-View
AT1G15360Encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. This gene is involved in wax biosynthesis. Over-expression of the gene results in glossy leaf phenotype and increased drought tolerance. Two closely related genes, AT5G25390 and AT5G11190 have similar phenotypes when over-expressed. Strong expression levels in flowers. Binds to the promoter of LACS2. Integrase-type DNA-binding superfamily protein SHINE 1 (SHN1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25390.2); Has 5918 Blast hits to 5765 proteins in 265 species: Archae - 0; Bacteria - 6; Metazoa - 9; Fungi - 23; Plants - 5843; Viruses - 2; Other Eukaryotes - 35 (source: NCBI BLink).1+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV5G22220No description available.Bvchr5.sca004-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00021G02330No description available.CM3.5_scaffold00021-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G14460No description available.scaffold_1+View
CRU_007G22830No description available.scaffold_7-View
CRU_008G00530No description available.scaffold_8-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0004G17280No description available.scaffold_4-View
EG0005G03420No description available.scaffold_5+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM11G03900No description available.Gm11-View
GM05G05130No description available.Gm05-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G23250No description available.Chr08-View
GR06G21410No description available.Chr06+View
GR03G17620No description available.Chr03-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ2G034090No description available.chr2-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME11581G00910No description available.scaffold11581-View
ME11341G00350No description available.scaffold11341-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G100380ethylene response factorchr4-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS02G43790ethylene-responsive transcription factor, putative, expressed2-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G26120No description available.scaffold_7+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G15410No description available.Chr01-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL10G006130Ethylene responsive transcription factor 3a (AHRD V1 **** C0J9I5_9ROSA)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch10-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST08G023750Ethylene-responsive transcription factor 1A (AHRD V1 **** A9P6A4_MEDTR); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingchr08-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0003G24250No description available.scaffold_3-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G16660similar to AT4G17500|ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1)ch7-4-View
TP2G12020similar to AT5G47220|ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)ch2-4-View


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Gene id
Species
Description
Chromosome
Strand