Anchorpoints
- Gene id
- BR07G31390
- Organism
- Brassica rapa
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR02G23610 | No description available. | A02 | - | View |
BR07G19730 | No description available. | A07 | + | View |
BR07G10410 | No description available. | A07 | + | View |
BR06G14750 | No description available. | A06 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL1G21590 | No description available. | scaffold_1 | - | View |
AL2G25070 | No description available. | scaffold_2 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G76180 | EARLY RESPONSE TO DEHYDRATION 14 (ERD14); FUNCTIONS IN: calcium ion binding; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrin (InterPro:IPR000167); BEST Arabidopsis thaliana protein match is: Dehydrin family protein (TAIR:AT1G20450.2); Has 4819 Blast hits to 3364 proteins in 392 species: Archae - 4; Bacteria - 256; Metazoa - 1221; Fungi - 272; Plants - 1466; Viruses - 16; Other Eukaryotes - 1584 (source: NCBI BLink). Dehydrin family protein Encodes a dehydrin protein whose expression is induced early on in response to dehydration stress. This gene's expression to cold occurs in two waves, with early induction occurring within 1 h and secondary induction occurring 5 h after the beginning of cold stress. Expression is also induced in response to ABA but not in response to 2,4-D, BA, and GA3. ERD14 protein is capable of binding Ca2+, especially when the protein is phosphorylated. | 1 | - | View |
AT1G20440 | Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. Cold regulated gene, amino acid sequence homology with Group II LEA (late embryogenesis abundant) proteins. Also responds to osmotic stress, ABA, dehydration and inhibits e.coli growth while overexpressed. COR47 and RAB18 double overexpressor plants are cold tolerant. cold-regulated 47 (COR47); CONTAINS InterPro DOMAIN/s: Dehydrin (InterPro:IPR000167); BEST Arabidopsis thaliana protein match is: Dehydrin family protein (TAIR:AT1G20450.1); Has 14264 Blast hits to 8754 proteins in 735 species: Archae - 48; Bacteria - 976; Metazoa - 4799; Fungi - 1094; Plants - 2502; Viruses - 117; Other Eukaryotes - 4728 (source: NCBI BLink). cold-regulated 47 | 1 | - | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR_00001G02920 | No description available. | scaffold00001 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV9G01430 | No description available. | Bvchr9.sca025 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL08G09370 | No description available. | Chr8 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00096G00580 | No description available. | CM3.5_scaffold00096 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00026G02260 | No description available. | supercontig_26 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_001G19100 | No description available. | scaffold_1 | - | View |
CRU_002G21770 | No description available. | scaffold_2 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00023G01390 | No description available. | scaffold00023 | + | View |
CS00002G06340 | No description available. | scaffold00002 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0006G14020 | No description available. | scaffold_6 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV2G11220 | Corepressor interacting with RBPJ 1 (similar to) | LG2 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR02G11960 | No description available. | Chr02 | + | View |
GR09G18950 | No description available. | Chr09 | + | View |
GR08G03870 | No description available. | Chr08 | - | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ5G002880 | No description available. | chr5 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD09G019260 | No description available. | 9 | + | View |
MD12G014220 | No description available. | 12 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME06708G00020 | No description available. | scaffold06708 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_008G18990 | No description available. | scaffold_8 | - | View |
PPE_001G36500 | No description available. | scaffold_1 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT05G24810 | No description available. | Chr05 | - | View |
PT02G01320 | No description available. | Chr02 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30170G06440 | No description available. | 30170 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL04G082200 | Dehydrin (AHRD V1 *-*- Q1A4H3_COFCA)%3B contains Interpro domain(s) IPR000167 Dehydrin | ch04 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST04G035610 | Dehydrin (Fragment) (AHRD V1 ***- E5F3B1_9SOLN); contains Interpro domain(s) IPR000167 Dehydrin | chr04 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0008G05340 | No description available. | scaffold_8 | - | View |
TC0002G04920 | No description available. | scaffold_2 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G18160 | similar to AT1G20450|ERD10 (EARLY RESPONSIVE TO DEHYDRATION 10) | ch1-1 | - | View |
TP5G31320 | similar to AT1G76180|ERD14 (EARLY RESPONSE TO DEHYDRATION 14) | ch5-7 | - | View |