Anchorpoints

Gene id
BR07G21280
Organism
Brassica rapa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BR02G21370No description available.A02-View
BR07G28390No description available.A07-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G20980No description available.scaffold_2-View
AL1G24100No description available.scaffold_1+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G22500RING/U-box superfamily protein Gene encodes a putative C3HC4-type RING zinc finger factor. it is induced in response to light and ascorbate stimulus. RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: stem, cotyledon, root, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G72200.1); Has 9627 Blast hits to 9604 proteins in 288 species: Archae - 0; Bacteria - 2; Metazoa - 2532; Fungi - 813; Plants - 4919; Viruses - 76; Other Eukaryotes - 1285 (source: NCBI BLink).1+View
AT1G72200RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G22500.1); Has 9343 Blast hits to 9316 proteins in 282 species: Archae - 0; Bacteria - 4; Metazoa - 2295; Fungi - 806; Plants - 4899; Viruses - 51; Other Eukaryotes - 1288 (source: NCBI BLink).1-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G21100No description available.scaffold_1+View
CRU_002G17930No description available.scaffold_2-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR11G05460No description available.Chr11+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME05875G01620No description available.scaffold05875-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G12040No description available.scaffold_2+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL12G055710RING finger protein 38 (AHRD V1 *-*- RNF38_HUMAN)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech12-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G19980similar to AT1G22500|zinc finger (C3HC4-type RING finger) family proteinch1-1+View
TP5G27290similar to AT1G72200|zinc finger (C3HC4-type RING finger) family proteinch5-6-View


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Gene id
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Description
Chromosome
Strand