Anchorpoints

Gene id
BR07G17830
Organism
Brassica rapa

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G29800No description available.scaffold_2-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G15980Coatomer, beta' subunit Coatomer, beta' subunit; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), Coatomer, beta' subunit (InterPro:IPR016453), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, beta' subunit (TAIR:AT1G52360.1).3-View
AT1G79990structural molecules; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, endomembrane system, COPI vesicle coat; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat (InterPro:IPR001680), Integral membrane protein SYS1-related (InterPro:IPR019185), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, beta' subunit (TAIR:AT1G52360.1); Has 74874 Blast hits to 32688 proteins in 816 species: Archae - 58; Bacteria - 8441; Metazoa - 30042; Fungi - 16255; Plants - 9898; Viruses - 0; Other Eukaryotes - 10180 (source: NCBI BLink). structural molecules1+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL07G13190No description available.Chr7+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00018G01840No description available.CM3.5_scaffold00018-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G26070No description available.scaffold_2-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM15G01680No description available.Gm15-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G13280No description available.Chr09-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02196G00200No description available.scaffold02196-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_003G05820No description available.scaffold_3+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G066730Coatomer beta%26apos subunit (AHRD V1 ***- Q0CXS2_ASPTN)%3B contains Interpro domain(s) IPR016453 Coatomer%2C beta' subunitch06+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST06G023220Coatomer subunit beta&apos (AHRD V1 **-- E2C5N9_9HYME); contains Interpro domain(s) IPR016453 Coatomer, beta' subunitchr06+View
ST12G021850Coatomer subunit beta&apos (AHRD V1 **-- E2C5N9_9HYME); contains Interpro domain(s) IPR016453 Coatomer, beta' subunitchr12-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G35770similar to AT1G79990|protein binding / structural moleculech5-7+View


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