Anchorpoints

Gene id
BR06G38200
Organism
Brassica rapa

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL8G05720No description available.scaffold_8+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G44200CAP-binding protein 20 (CBP20); FUNCTIONS IN: RNA binding, RNA cap binding; INVOLVED IN: RNA metabolic process, RNA splicing, via endonucleolytic cleavage and ligation, primary microRNA processing; LOCATED IN: mRNA cap binding complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G46020.1); Has 1672 Blast hits to 1670 proteins in 70 species: Archae - 0; Bacteria - 6; Metazoa - 7; Fungi - 2; Plants - 1623; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). Encodes a nuclear cap-binding protein that forms a heterodimeric complex with ABH1 (ATCBP80) and is likely to participate in RNA metabolism. Its mRNA is ubiquitously expressed.Loss of function mutations suggest a role in processing of pri-miRNA and mRNA splicing. CAP-binding protein 205-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_008G04230No description available.scaffold_8+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0011G08790No description available.scaffold_11+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G21850Nuclear cap-binding protein subunit 2 (AtCBP20) (probable)LG6-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM13G37030No description available.Gm13-View
GM12G33400No description available.Gm12+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR05G19960No description available.Chr05-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02307G00230No description available.scaffold02307-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G090655nuclear cap-binding protein subunit 2chr2+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT07G13740No description available.Chr07-View
PT17G01460No description available.Chr17+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29983G00380No description available.29983-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G18000No description available.scaffold_2+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G09020similar to AT5G44200|CBP20 (CAP-BINDING PROTEIN 20)ch2-4-View


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Gene id
Species
Description
Chromosome
Strand