Anchorpoints

Gene id
BR06G01560
Organism
Brassica rapa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BR03G34430No description available.A03+View
BR05G27490No description available.A05-View
BR01G33250No description available.A01-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G47850No description available.scaffold_1-View
AL3G16510No description available.scaffold_3+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G52830indole-3-acetic acid 6 (IAA6); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 19 (TAIR:AT3G15540.1); Has 1737 Blast hits to 1736 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1736; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). An extragenic dominant suppressor of the hy2 mutant phenotype. Also exhibits aspects of constitutive photomorphogenetic phenotype in the absence of hy2. Mutants have dominant leaf curling phenotype shortened hypocotyls and reduced apical hook. Induced by indole-3-acetic acid. indole-3-acetic acid 61-View
AT3G15540Primary auxin-responsive gene. Involved in the regulation stamen filaments development. indole-3-acetic acid inducible 19 (IAA19); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: phototropism, gravitropism, response to auxin stimulus, response to brassinosteroid stimulus, stamen filament development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid 6 (TAIR:AT1G52830.1); Has 1781 Blast hits to 1780 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1780; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). indole-3-acetic acid inducible 193+View
AT1G15580indole-3-acetic acid inducible 5 (IAA5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone, response to brassinosteroid stimulus; LOCATED IN: nucleus; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 19 (TAIR:AT3G15540.1); Has 1807 Blast hits to 1806 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1806; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). indole-3-acetic acid inducible 5 auxin induced protein1-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL09G02020No description available.Chr9+View
CL07G13210No description available.Chr7+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00060G00120No description available.CM3.5_scaffold00060+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G14670No description available.scaffold_1-View
CRU_003G14550No description available.scaffold_3+View
CRU_001G40040No description available.scaffold_1-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G25710No description available.scaffold_10+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM15G01550No description available.Gm15-View
GM13G43780No description available.Gm13+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G102490auxin-responsive AUX/IAA family proteinchr2+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_003G06100No description available.scaffold_3+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G17740No description available.Chr01-View
PT03G05690No description available.Chr03+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST06G023310Auxin responsive protein (AHRD V1 ***- D9IQE6_CATRO); contains Interpro domain(s) IPR003311 AUX/IAA proteinchr06+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G39420similar to AT1G52830|IAA6 (INDOLE-3-ACETIC ACID 6)ch1-2-View
TP3G13810similar to AT3G15540|IAA19 (INDOLE-3-ACETIC ACID INDUCIBLE 19)ch3-1+View


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Gene id
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Description
Chromosome
Strand