Anchorpoints
- Gene id
- BR05G27490
- Organism
- Brassica rapa
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR06G01560 | No description available. | A06 | + | View |
BR03G34430 | No description available. | A03 | + | View |
BR01G33250 | No description available. | A01 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL1G47850 | No description available. | scaffold_1 | - | View |
AL2G29410 | No description available. | scaffold_2 | + | View |
AL3G16510 | No description available. | scaffold_3 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G52830 | indole-3-acetic acid 6 (IAA6); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 19 (TAIR:AT3G15540.1); Has 1737 Blast hits to 1736 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1736; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). An extragenic dominant suppressor of the hy2 mutant phenotype. Also exhibits aspects of constitutive photomorphogenetic phenotype in the absence of hy2. Mutants have dominant leaf curling phenotype shortened hypocotyls and reduced apical hook. Induced by indole-3-acetic acid. indole-3-acetic acid 6 | 1 | - | View |
AT3G15540 | Primary auxin-responsive gene. Involved in the regulation stamen filaments development. indole-3-acetic acid inducible 19 (IAA19); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: phototropism, gravitropism, response to auxin stimulus, response to brassinosteroid stimulus, stamen filament development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid 6 (TAIR:AT1G52830.1); Has 1781 Blast hits to 1780 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1780; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). indole-3-acetic acid inducible 19 | 3 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV9G16360 | No description available. | Bvchr9.sca026 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL07G13210 | No description available. | Chr7 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00060G00120 | No description available. | CM3.5_scaffold00060 | + | View |
CM00018G01800 | No description available. | CM3.5_scaffold00018 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00010G01580 | No description available. | supercontig_10 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_003G14550 | No description available. | scaffold_3 | + | View |
CRU_001G40040 | No description available. | scaffold_1 | - | View |
CRU_002G25730 | No description available. | scaffold_2 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0010G25710 | No description available. | scaffold_10 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM08G22190 | Auxin-induced protein AUX22 | Gm08 | + | View |
GM15G01550 | No description available. | Gm15 | - | View |
GM07G03840 | No description available. | Gm07 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT2G102490 | auxin-responsive AUX/IAA family protein | chr2 | + | View |
MT4G011880 | auxin-responsive AUX/IAA family protein | chr4 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_003G06100 | No description available. | scaffold_3 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST06G023310 | Auxin responsive protein (AHRD V1 ***- D9IQE6_CATRO); contains Interpro domain(s) IPR003311 AUX/IAA protein | chr06 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G39420 | similar to AT1G52830|IAA6 (INDOLE-3-ACETIC ACID 6) | ch1-2 | - | View |
TP3G13810 | similar to AT3G15540|IAA19 (INDOLE-3-ACETIC ACID INDUCIBLE 19) | ch3-1 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV09G05620 | name=GSVIVG01017158001; | chr9 | + | View |