Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- BR05G18600
- Organism
- Brassica rapa
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL1G42460 | No description available. | scaffold_1 | - | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G48760 | Encodes the putative delta subunit of the AP(adaptor protein)-3 complex and plays a role in vacuolar function. delta-adaptin delta-adaptin (delta-ADR); FUNCTIONS IN: protein transporter activity, clathrin binding, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, Golgi apparatus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Adaptor protein complex AP-3, delta subunit (InterPro:IPR017105), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: Adaptor protein complex AP-1, gamma subunit (TAIR:AT1G60070.1); Has 3854 Blast hits to 3636 proteins in 331 species: Archae - 0; Bacteria - 22; Metazoa - 1599; Fungi - 800; Plants - 408; Viruses - 0; Other Eukaryotes - 1025 (source: NCBI BLink). | 1 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_003G17260 | No description available. | scaffold_3 | - | View |
| CRU_001G35940 | No description available. | scaffold_1 | - | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD14G021380 | No description available. | 14 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL03G119270 | AP-3 complex delta subunit-like protein (AHRD V1 ***- Q5QMU1_ORYSJ)%3B contains Interpro domain(s) IPR017105 Adaptor protein complex AP-3%2C delta subunit | ch03 | - | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP1G35680 | similar to AT1G48760|delta-ADR (delta-adaptin) | ch1-2 | - | View |
| TP3G16410 | similar to AT1G48760|delta-ADR (delta-adaptin) | ch3-1 | - | View |