Anchorpoints

Gene id
BR03G17360
Organism
Brassica rapa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BR05G09440No description available.A05-View
BR04G20890No description available.A04+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G20560No description available.scaffold_4+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G35230Contains a plant-specific VQ motif. Involved in endosperm growth and seed size determination. IKU1 is expressed in the early endosperm and its progenitor, the central cell.IKU1 interacts with MINI3 in the yeast two-hybrid system. VQ motif-containing protein IKU1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of seed growth, endosperm development; LOCATED IN: polar nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G32610.2); Has 32531 Blast hits to 21168 proteins in 1133 species: Archae - 22; Bacteria - 2536; Metazoa - 15453; Fungi - 6059; Plants - 4197; Viruses - 550; Other Eukaryotes - 3714 (source: NCBI BLink).2+View
AT1G32610hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT2G35230.1); Has 506 Blast hits to 500 proteins in 131 species: Archae - 0; Bacteria - 7; Metazoa - 178; Fungi - 141; Plants - 111; Viruses - 9; Other Eukaryotes - 60 (source: NCBI BLink). hydroxyproline-rich glycoprotein family protein1-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G16350No description available.scaffold_4+View
CRU_001G29570No description available.scaffold_1-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0004G18070No description available.scaffold_4+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G17450similar to AT2G35230|VQ motif-containing proteinch4-6+View


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Gene id
Species
Description
Chromosome
Strand