Anchorpoints

Gene id
BR02G23420
Organism
Brassica rapa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BR06G14740No description available.A06-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G24700No description available.scaffold_2-View
AL2G25050No description available.scaffold_2-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G75790SKU5 similar 18 (sks18); FUNCTIONS IN: pectinesterase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 4 (TAIR:AT4G22010.1); Has 5415 Blast hits to 5364 proteins in 985 species: Archae - 6; Bacteria - 1763; Metazoa - 267; Fungi - 1922; Plants - 1275; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). SKU5 similar 181-View
AT1G76160SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). SKU5 similar 51-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00014G06980No description available.CM3.5_scaffold00014+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G21350No description available.scaffold_2-View
CRU_002G21750No description available.scaffold_2-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G19430No description available.Chr09+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02943G00310No description available.scaffold02943-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G02100No description available.Chr02+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G081520Laccase-16 (AHRD V1 **-- LAC16_ARATH)%3B contains Interpro domain(s) IPR008972 Cupredoxinch04+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0008G04380No description available.scaffold_8-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G31290similar to AT1G76160|sks5 (SKU5 Similar 5)ch5-7-View
TP5G30910similar to AT1G75790|sks18 (SKU5 Similar 18)ch5-7-View
TP1G18140similar to AT1G21860|sks7 (SKU5 Similar 7)ch1-1-View


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Gene id
Species
Description
Chromosome
Strand