Anchorpoints
- Gene id
- BR01G17380
- Organism
- Brassica rapa
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR08G28770 | No description available. | A08 | - | View |
BR03G49430 | No description available. | A03 | + | View |
BR10G08340 | No description available. | A10 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL7G14920 | No description available. | scaffold_7 | - | View |
AL8G20120 | No description available. | scaffold_8 | - | View |
AL1G11860 | No description available. | scaffold_1 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G54810 | A.thaliana tryptophan synthase beta subunit (trpB) tryptophan synthase beta-subunit 1 (TSB1); FUNCTIONS IN: tryptophan synthase activity; INVOLVED IN: response to oxidative stress, tryptophan biosynthetic process, response to salt stress, indoleacetic acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: guard cell, root; CONTAINS InterPro DOMAIN/s: Tryptophan synthase, beta chain (InterPro:IPR006654), Tryptophan synthase, beta chain, conserved site (InterPro:IPR006653), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 2 (TAIR:AT4G27070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). tryptophan synthase beta-subunit 1 | 5 | - | View |
AT4G27070 | tryptophan synthase beta-subunit 2 Tryptophan synthase beta. Expressed at low levels in all tissues. tryptophan synthase beta-subunit 2 (TSB2); CONTAINS InterPro DOMAIN/s: Tryptophan synthase, beta chain (InterPro:IPR006654), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Tryptophan synthase, beta chain, conserved site (InterPro:IPR006653); BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 1 (TAIR:AT5G54810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | 4 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_007G12980 | No description available. | scaffold_7 | - | View |
CRU_001G10650 | No description available. | scaffold_1 | + | View |
CRU_008G14710 | No description available. | scaffold_8 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0006G29220 | No description available. | scaffold_6 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR09G42550 | No description available. | Chr09 | + | View |
GR13G16130 | No description available. | Chr13 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME03241G00640 | No description available. | scaffold03241 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_004G19910 | No description available. | scaffold_4 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT11G13600 | No description available. | Chr11 | - | View |
PT01G42030 | No description available. | Chr01 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL07G064280 | Tryptophan synthase beta chain 1 (AHRD V1 **** Q0WUI8_ARATH)%3B contains Interpro domain(s) IPR006654 Tryptophan synthase%2C beta chain | ch07 | - | View |
SL10G006400 | Tryptophan synthase beta chain 1 (AHRD V1 **** Q0WUI8_ARATH)%3B contains Interpro domain(s) IPR006654 Tryptophan synthase%2C beta chain | ch10 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST10G005160 | Tryptophan synthase beta chain 1 (AHRD V1 ***- Q0WUI8_ARATH); contains Interpro domain(s) IPR006654 Tryptophan synthase, beta chain | chr10 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G16750 | similar to AT5G54810|TSB1 (TRYPTOPHAN SYNTHASE BETA-SUBUNIT 1) | ch6-6 | - | View |
TP7G25040 | similar to AT4G27070|TSB2 (TRYPTOPHAN SYNTHASE BETA-SUBUNIT 2) | ch7-4 | + | View |
TP1G10210 | similar to AT5G28237|tryptophan synthase, beta subunit, putative | ch1-1 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV19G00650 | name=GSVIVG01001997001; | chr19 | - | View |