Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G16080No description available.scaffold_2+View
AL5G01030No description available.scaffold_5-View
AL1G15480No description available.scaffold_1+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G14685Encodes a member of the BASIC PENTACYSTEINE (BPC) proteins. BPC proteins are plant-specific transcription factors present throughout land plants. BPC transcription factor family is integral for a wide range of processes that support normal growth and development. basic pentacysteine 2 (BPC2); CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: basic pentacysteine1 (TAIR:AT2G01930.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). basic pentacysteine 21+View
AT2G01930BASIC PENTACYSTEINE1 (BPC1) is a regulator of the homeotic Arabidopsis thaliana gene SEEDSTICK (STK), which controls ovule identity. BPC1 induces conformational changes by cooperative binding to purine-rich elements present in the STK regulatory sequence. STK is upregulated in bpc1 mutant. basic pentacysteine1 basic pentacysteine1 (BPC1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity, specific transcriptional repressor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: basic pentacysteine 2 (TAIR:AT1G14685.1); Has 220 Blast hits to 218 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR09G48060No description available.A09-View
BR08G27340No description available.A08-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G06600No description available.Chr1-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00005G01800No description available.CM3.5_scaffold00005+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00002G01130No description available.supercontig_2+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G13820No description available.scaffold_1+View
CRU_005G00870No description available.scaffold_5-View
CRU_002G13730No description available.scaffold_2-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0008G04940No description available.scaffold_8-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM08G09780No description available.Gm08+View
GM09G30040No description available.Gm09+View
GM05G26790No description available.Gm05+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR02G17120No description available.Chr02+View
GR05G15420No description available.Chr05-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ2G009610No description available.chr2+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME08799G00930No description available.scaffold08799-View
ME10173G00460No description available.scaffold10173-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G34690No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT08G14020No description available.Chr08-View
PT15G03280No description available.Chr15-View
PT12G04030No description available.Chr12+View
PT10G10140No description available.Chr10+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29780G00780No description available.29780-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G008380GAGA-binding transcriptional activator (AHRD V1 ***- D7KCI3_ARALY)%3B contains Interpro domain(s) IPR010409 GAGA binding-likech04-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST04G007040GAGA-binding transcriptional activator (AHRD V1 ***- Q2PQR3_9BRAS); contains Interpro domain(s) IPR010409 GAGA binding-likechr04+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G30270No description available.scaffold_2+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G23120similar to AT1G68120|BPC3 (BASIC PENTACYSTEINE 3)ch5-6-View
TP1G13070similar to AT1G14685|BPC2 (BASIC PENTACYSTEINE 2)ch1-1+View
TP2G13370similar to AT2G01930|BPC1 (BASIC PENTACYSTEINE1)ch2-4-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G05300name=GSVIVG01011589001;chr1-View


Download

Gene id
Species
Description
Chromosome
Strand