Anchorpoints

Gene id
AT5G65420
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT5G10440cyclin d4;2 (CYCD4;2); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D4;1 (TAIR:AT5G65420.1); Has 2823 Blast hits to 2820 proteins in 293 species: Archae - 0; Bacteria - 0; Metazoa - 1255; Fungi - 334; Plants - 962; Viruses - 9; Other Eukaryotes - 263 (source: NCBI BLink). Encodes a cyclin involved in cell proliferation during stomatal cell lineage development. cyclin d4;25-View
AT2G22490Cyclin D2;1 encodes a D-type cyclin whose transcription level is regulated by sucrose but not phytohormones or nitrate. Protein physically interacts with CDC2A. CycD2 kinase activity is regulated by sequestration of CycD2 protein in a form inaccessible to immunoprecipitation and probably not complexed to CDC2A. Cyclin D2;1 (CYCD2;1); FUNCTIONS IN: protein binding, cyclin-dependent protein kinase regulator activity; INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle, response to sucrose stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D4;1 (TAIR:AT5G65420.1).2-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G10150No description available.scaffold_6-View
AL4G01950No description available.scaffold_4-View
AL8G32230No description available.scaffold_8-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR10G22970No description available.A10+View
BR06G23290No description available.A06-View
BR02G41130No description available.A02-View
BR09G07240No description available.A09-View
BR09G09620No description available.A09+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G05460No description available.Bvchr6.sca005-View
BV1G10070No description available.Bvchr1.sca002-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL08G11230No description available.Chr8-View
CL01G18730No description available.Chr1+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00007G07540No description available.CM3.5_scaffold00007+View
CM00014G04320No description available.CM3.5_scaffold00014-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00055G00360No description available.supercontig_55-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_008G25490No description available.scaffold_8-View
CRU_004G01560No description available.scaffold_4-View
CRU_006G08690No description available.scaffold_6-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00004G02740No description available.scaffold00004-View
CS00059G00420No description available.scaffold00059+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G17270No description available.scaffold_6-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV1G26270Cyclin-D2-1 (CycD2) (putative)LG1-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM04G09840No description available.Gm04+View
GM08G38440No description available.Gm08+View
GM01G03030No description available.Gm01+View
GM14G35850No description available.Gm14-View
GM02G04590No description available.Gm02-View
GM06G09910No description available.Gm06+View
GM02G37560No description available.Gm02-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G05930No description available.Chr07+View
GR07G23360No description available.Chr07+View
GR10G03580No description available.Chr10+View
GR09G23130No description available.Chr09+View
GR08G09210No description available.Chr08+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD11G014760No description available.11+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06916G01990No description available.scaffold06916+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G100710carboxy-terminal domain cyclinchr3-View
MT8G068950carboxy-terminal domain cyclinchr8+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS09G29100cyclin, putative, expressed Cyclin-D4-19+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G58740No description available.scaffold_1+View
PPE_006G20360No description available.scaffold_6-View
PPE_006G23860No description available.scaffold_6-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G10350No description available.Chr02-View
PT05G15780No description available.Chr05+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL11G010460Cyclin D2 (AHRD V1 ***- Q8L6U0_DAUCA)%3B contains Interpro domain(s) IPR015451 Cyclin Dch11-View
SL05G051410Cyclin D2 (AHRD V1 ***- Q8L6U0_DAUCA)%3B contains Interpro domain(s) IPR015451 Cyclin Dch05+View
SL04G076040Cyclin d2 (AHRD V1 **** Q6T2Z7_SOYBN)%3B contains Interpro domain(s) IPR015451 Cyclin Dch04-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST04G029600Cyclin d2 (AHRD V1 **** Q6T2Z7_SOYBN); contains Interpro domain(s) IPR015451 Cyclin Dchr04+View
ST11G009240Cyclin D2 (AHRD V1 ***- Q8L6U0_DAUCA); contains Interpro domain(s) IPR015451 Cyclin Dchr11+View
ST12G025980Cyclin d2 (AHRD V1 ***- Q6T2Z7_SOYBN); contains Interpro domain(s) IPR015451 Cyclin Dchr12-View
ST05G023820Cyclin D2 (AHRD V1 ***- Q8L6U0_DAUCA); contains Interpro domain(s) IPR015451 Cyclin Dchr05+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0008G06590No description available.scaffold_8-View
TC0001G08870No description available.scaffold_1+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G33010similar to AT5G10440|CYCD4ch6-6+View
TP2G28500similar to AT5G65420|CYCD4ch2-4-View
TP4G01510similar to AT2G22490|CYCD2ch4-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G04300name=GSVIVG01009139001;chr18-View
VV00G06850name=GSVIVG01003610001;chrUn+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM07G16590cyclin delta-27+View
ZM04G27270LOC5419154+View


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Gene id
Species
Description
Chromosome
Strand