Anchorpoints
- Gene id
- AT5G65420
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G10440 | cyclin d4;2 (CYCD4;2); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D4;1 (TAIR:AT5G65420.1); Has 2823 Blast hits to 2820 proteins in 293 species: Archae - 0; Bacteria - 0; Metazoa - 1255; Fungi - 334; Plants - 962; Viruses - 9; Other Eukaryotes - 263 (source: NCBI BLink). Encodes a cyclin involved in cell proliferation during stomatal cell lineage development. cyclin d4;2 | 5 | - | View |
AT2G22490 | Cyclin D2;1 encodes a D-type cyclin whose transcription level is regulated by sucrose but not phytohormones or nitrate. Protein physically interacts with CDC2A. CycD2 kinase activity is regulated by sequestration of CycD2 protein in a form inaccessible to immunoprecipitation and probably not complexed to CDC2A. Cyclin D2;1 (CYCD2;1); FUNCTIONS IN: protein binding, cyclin-dependent protein kinase regulator activity; INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle, response to sucrose stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D4;1 (TAIR:AT5G65420.1). | 2 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL6G10150 | No description available. | scaffold_6 | - | View |
AL4G01950 | No description available. | scaffold_4 | - | View |
AL8G32230 | No description available. | scaffold_8 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR10G22970 | No description available. | A10 | + | View |
BR06G23290 | No description available. | A06 | - | View |
BR02G41130 | No description available. | A02 | - | View |
BR09G07240 | No description available. | A09 | - | View |
BR09G09620 | No description available. | A09 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV6G05460 | No description available. | Bvchr6.sca005 | - | View |
BV1G10070 | No description available. | Bvchr1.sca002 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL08G11230 | No description available. | Chr8 | - | View |
CL01G18730 | No description available. | Chr1 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00007G07540 | No description available. | CM3.5_scaffold00007 | + | View |
CM00014G04320 | No description available. | CM3.5_scaffold00014 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00055G00360 | No description available. | supercontig_55 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_008G25490 | No description available. | scaffold_8 | - | View |
CRU_004G01560 | No description available. | scaffold_4 | - | View |
CRU_006G08690 | No description available. | scaffold_6 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00004G02740 | No description available. | scaffold00004 | - | View |
CS00059G00420 | No description available. | scaffold00059 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0006G17270 | No description available. | scaffold_6 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV1G26270 | Cyclin-D2-1 (CycD2) (putative) | LG1 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM04G09840 | No description available. | Gm04 | + | View |
GM08G38440 | No description available. | Gm08 | + | View |
GM01G03030 | No description available. | Gm01 | + | View |
GM14G35850 | No description available. | Gm14 | - | View |
GM02G04590 | No description available. | Gm02 | - | View |
GM06G09910 | No description available. | Gm06 | + | View |
GM02G37560 | No description available. | Gm02 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR07G05930 | No description available. | Chr07 | + | View |
GR07G23360 | No description available. | Chr07 | + | View |
GR10G03580 | No description available. | Chr10 | + | View |
GR09G23130 | No description available. | Chr09 | + | View |
GR08G09210 | No description available. | Chr08 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD11G014760 | No description available. | 11 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME06916G01990 | No description available. | scaffold06916 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT3G100710 | carboxy-terminal domain cyclin | chr3 | - | View |
MT8G068950 | carboxy-terminal domain cyclin | chr8 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS09G29100 | cyclin, putative, expressed Cyclin-D4-1 | 9 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G58740 | No description available. | scaffold_1 | + | View |
PPE_006G20360 | No description available. | scaffold_6 | - | View |
PPE_006G23860 | No description available. | scaffold_6 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT02G10350 | No description available. | Chr02 | - | View |
PT05G15780 | No description available. | Chr05 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL11G010460 | Cyclin D2 (AHRD V1 ***- Q8L6U0_DAUCA)%3B contains Interpro domain(s) IPR015451 Cyclin D | ch11 | - | View |
SL05G051410 | Cyclin D2 (AHRD V1 ***- Q8L6U0_DAUCA)%3B contains Interpro domain(s) IPR015451 Cyclin D | ch05 | + | View |
SL04G076040 | Cyclin d2 (AHRD V1 **** Q6T2Z7_SOYBN)%3B contains Interpro domain(s) IPR015451 Cyclin D | ch04 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST04G029600 | Cyclin d2 (AHRD V1 **** Q6T2Z7_SOYBN); contains Interpro domain(s) IPR015451 Cyclin D | chr04 | + | View |
ST11G009240 | Cyclin D2 (AHRD V1 ***- Q8L6U0_DAUCA); contains Interpro domain(s) IPR015451 Cyclin D | chr11 | + | View |
ST12G025980 | Cyclin d2 (AHRD V1 ***- Q6T2Z7_SOYBN); contains Interpro domain(s) IPR015451 Cyclin D | chr12 | - | View |
ST05G023820 | Cyclin D2 (AHRD V1 ***- Q8L6U0_DAUCA); contains Interpro domain(s) IPR015451 Cyclin D | chr05 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0008G06590 | No description available. | scaffold_8 | - | View |
TC0001G08870 | No description available. | scaffold_1 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G33010 | similar to AT5G10440|CYCD4 | ch6-6 | + | View |
TP2G28500 | similar to AT5G65420|CYCD4 | ch2-4 | - | View |
TP4G01510 | similar to AT2G22490|CYCD2 | ch4-1 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV18G04300 | name=GSVIVG01009139001; | chr18 | - | View |
VV00G06850 | name=GSVIVG01003610001; | chrUn | + | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM07G16590 | cyclin delta-2 | 7 | + | View |
ZM04G27270 | LOC541915 | 4 | + | View |