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WorkbenchAnchorpoints
- Gene id
- AT5G59850
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT3G46040 | ribosomal protein S15A D ribosomal protein S15A D (RPS15AD); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8 (InterPro:IPR000630); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8 family protein (TAIR:AT5G59850.1); Has 3503 Blast hits to 3503 proteins in 1362 species: Archae - 277; Bacteria - 1878; Metazoa - 431; Fungi - 223; Plants - 255; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink). Regulated by TCP20. | 3 | + | View |
| AT1G07770 | ribosomal protein S15A ribosomal protein S15A (RPS15A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, cell wall, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8 (InterPro:IPR000630); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8 family protein (TAIR:AT5G59850.1); Has 3677 Blast hits to 3677 proteins in 1417 species: Archae - 277; Bacteria - 1997; Metazoa - 434; Fungi - 223; Plants - 257; Viruses - 0; Other Eukaryotes - 489 (source: NCBI BLink). Encodes cytoplasmic ribosomal protein S15a. | 1 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL8G26040 | No description available. | scaffold_8 | - | View |
| AL5G14290 | No description available. | scaffold_5 | + | View |
| AL1G07390 | No description available. | scaffold_1 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR02G11930 | No description available. | A02 | + | View |
| BR03G10250 | No description available. | A03 | + | View |
| BR10G12590 | No description available. | A10 | - | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BV7G07020 | No description available. | Bvchr7.sca021 | + | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL03G01940 | No description available. | Chr3 | - | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00044G02420 | No description available. | CM3.5_scaffold00044 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00001G03500 | No description available. | supercontig_1 | - | View |
| CP00190G00250 | No description available. | supercontig_190 | + | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_001G06750 | No description available. | scaffold_1 | - | View |
| CRU_005G11190 | No description available. | scaffold_5 | + | View |
| CRU_008G20030 | No description available. | scaffold_8 | + | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00024G00830 | No description available. | scaffold00024 | + | View |
| CS00014G00890 | No description available. | scaffold00014 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV0G31880 | 40S ribosomal protein S15a-1 | scf0513178 | + | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR09G10130 | No description available. | Chr09 | + | View |
| GR01G10820 | No description available. | Chr01 | - | View |
| GR03G13610 | No description available. | Chr03 | + | View |
| GR13G26500 | No description available. | Chr13 | + | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD11G008430 | No description available. | 11 | + | View |
| MD03G007450 | No description available. | 3 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME07168G00060 | No description available. | scaffold07168 | + | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_002G22200 | No description available. | scaffold_2 | + | View |
| PPE_006G08210 | No description available. | scaffold_6 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT10G20870 | No description available. | Chr10 | + | View |
| PT08G05190 | No description available. | Chr08 | - | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC29154G00090 | No description available. | 29154 | + | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0009G32150 | No description available. | scaffold_9 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP5G15560 | similar to AT3G46040|RPS15AD (ribosomal protein S15A D) | ch5-1 | - | View |
| TP6G21540 | similar to AT5G59850|40S ribosomal protein S15A (RPS15aF) | ch6-6 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV13G05670 | name=GSVIVG01016595001; | chr13 | - | View |