PLAZA 3.0 Dicots : colinear gene pairs

Anchorpoints

Gene id: AT5G57810
Organism: Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
AT4G30430	tetraspanin9 (TET9); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: tetraspanin8 (TAIR:AT2G23810.1); Has 465 Blast hits to 462 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 35; Fungi - 0; Plants - 430; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). tetraspanin9 Member of TETRASPANIN family	4	-	View

Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id	Description	Chromosome	Strand	Multiplicon
AL7G11140	No description available.	scaffold_7	+	View
AL8G23550	No description available.	scaffold_8	-	View

Brassica rapa

Gene id	Description	Chromosome	Strand	Multiplicon
BR01G07030	No description available.	A01	+	View
BR10G10930	No description available.	A10	-	View
BR02G13240	No description available.	A02	+	View

Beta vulgaris

Gene id	Description	Chromosome	Strand	Multiplicon
BV8G15790	No description available.	Bvchr8.sca017	+	View

Citrullus lanatus

Gene id	Description	Chromosome	Strand	Multiplicon
CL06G13360	No description available.	Chr6	-	View

Capsella rubella

Gene id	Description	Chromosome	Strand	Multiplicon
CRU_007G09630	No description available.	scaffold_7	+	View
CRU_008G17860	No description available.	scaffold_8	-	View

Eucalyptus grandis

Gene id	Description	Chromosome	Strand	Multiplicon
EG0003G01790	No description available.	scaffold_3	-	View

Glycine max

Gene id	Description	Chromosome	Strand	Multiplicon
GM17G07700	No description available.	Gm17	-	View
GM13G01580	No description available.	Gm13	-	View

Gossypium raimondii

Gene id	Description	Chromosome	Strand	Multiplicon
GR04G27330	No description available.	Chr04	-	View
GR04G10430	No description available.	Chr04	-	View

Medicago truncatula

Gene id	Description	Chromosome	Strand	Multiplicon
MT4G129670	tetraspanin family protein	chr4	-	View

Oryza sativa ssp. japonica

Gene id	Description	Chromosome	Strand	Multiplicon
OS06G44310	tetraspanin family protein, putative, expressed	6	+	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT18G09980	No description available.	Chr18	-	View
PT06G17790	No description available.	Chr06	-	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL07G006280	Senescence-associated protein (AHRD V1 ***- B3TLS7_ELAGV)%3B contains Interpro domain(s) IPR000301 Tetraspanin%2C subgroup	ch07	+	View

Solanum tuberosum

Gene id	Description	Chromosome	Strand	Multiplicon
ST07G005630	Senescence-associated protein (AHRD V1 ***- B3TLS7_ELAGV); contains Interpro domain(s) IPR000301 Tetraspanin, subgroup	chr07	-	View

Theobroma cacao

Gene id	Description	Chromosome	Strand	Multiplicon
TC0009G15280	No description available.	scaffold_9	-	View

Thellungiella parvula

Gene id	Description	Chromosome	Strand	Multiplicon
TP7G28310	similar to AT4G30430\|TET9 (TETRASPANIN9)	ch7-5	-	View
TP6G19490	similar to AT5G57810\|TET15 (TETRASPANIN15)	ch6-6	-	View

Vitis vinifera

Gene id	Description	Chromosome	Strand	Multiplicon
VV11G07980	name=GSVIVG01023726001;	chr11	+	View