Anchorpoints

Gene id
AT5G49720
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT4G24260glycosyl hydrolase 9A3 (GH9A3); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9A1 (TAIR:AT5G49720.1); Has 1666 Blast hits to 1648 proteins in 232 species: Archae - 2; Bacteria - 516; Metazoa - 186; Fungi - 17; Plants - 908; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). Encodes a protein with similarity to endo-1,4-b-glucanases. KOR3 is induced by nemotodes and is expressed in syncitia induced by Heterodera schachtii.May be involved in the development and function of syncitia. glycosyl hydrolase 9A34-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G17890No description available.scaffold_7+View
AL8G13600No description available.scaffold_8-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR01G14250No description available.A01-View
BR03G24420No description available.A03-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL09G04200No description available.Chr9+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_008G09430No description available.scaffold_8-View
CRU_007G15910No description available.scaffold_7+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0007G00250No description available.scaffold_7-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD08G023240No description available.8+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G102580Endo-1 4-beta-glucanase (AHRD V1 ***- O04890_SOLLC)%3B contains Interpro domain(s) IPR008928 Six-hairpin glycosidase-like IPR018221 Glycoside hydrolase%2C family 9%2C active site IPR001701 Glycoside hydrolase%2C family 9ch01-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G039470Endo-1 4-beta-glucanase (AHRD V1 ***- O04890_SOLLC); contains Interpro domain(s) IPR001701 Glycoside hydrolase, family 9chr01-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G10990similar to AT5G49720|ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1)ch6-4-View
TP7G22240similar to AT4G24260|ATGH9A3 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A3)ch7-4-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV12G06120name=GSVIVG01023102001;chr12+View


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Gene id
Species
Description
Chromosome
Strand