Anchorpoints

Gene id
AT5G42780
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G75240homeobox protein 33 (HB33); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 24 (TAIR:AT2G18350.1); Has 705 Blast hits to 675 proteins in 76 species: Archae - 0; Bacteria - 8; Metazoa - 117; Fungi - 10; Plants - 549; Viruses - 3; Other Eukaryotes - 18 (source: NCBI BLink). Encodes a zinc finger-homeodomain transcription factor ZHD5. Nuclear import and DNA binding of the ZHD5 transcription factor is modulated by a competitive peptide inhibitor MIF1 (AT1G74660). homeobox protein 331+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL8G08110No description available.scaffold_8-View
AL2G24110No description available.scaffold_2+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G20000No description available.A07-View
BR09G20560No description available.A09+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G20820No description available.scaffold_2+View
CRU_008G06030No description available.scaffold_8-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00002G04340No description available.scaffold00002+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G12700No description available.scaffold_6+View
EG0007G15570No description available.scaffold_7-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G50790ZF-HD homeobox protein At4g24660 (AtHB-22) (probable)LG2-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD12G015750No description available.12-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G38640No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G03520No description available.Chr02-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30170G04070No description available.30170+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G080490Zinc finger-homeodomain protein 1 (Fragment) (AHRD V1 *--- B0LK17_YUCFI)%3B contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation regionch04-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0008G02700No description available.scaffold_8+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G30400similar to AT1G75240|AtHB33 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 33)ch5-7+View
TP2G07430similar to AT5G42780|AtHB27 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 27)ch2-4+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G09000name=GSVIVG01009721001;chr18+View


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Gene id
Species
Description
Chromosome
Strand